RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ARHGDIGQ99819 225 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 TESQ9UGI8 421 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 KCNE5Q9UJ90 142 aa14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 RRP15Q9Y3B9 282 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-212ENST00000545856 MKRN2OSH3BPM6 223 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF264O43296 627 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 NDUFB5O43674 189 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 PRKD3O94806 890 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 CSTAP01040 98 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 SEMG1P04279 462 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 UBL4AP11441 157 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 FBXW4P57775 412 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 RIPK1Q13546 671 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 DUSP7Q16829 419 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 MRPL2Q5T653 305 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 RANBP3LQ86VV4 465 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 OR10G3Q8NGC4 313 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 SLC47A1Q96FL8 570 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF347Q96SE7 839 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 OSBPL11Q9BXB4 747 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 ANGPTL4Q9BY76 406 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 LAT2Q9GZY6 243 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 METTL7AQ9H8H3 244 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 LIN28AQ9H9Z2 209 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 IL1RAPQ9NPH3 570 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 SACM1LQ9NTJ5 587 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 LRFN1Q9P244 771 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 TUBD1Q9UJT1 453 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 WIF1Q9Y5W5 379 aa14.68□□□□□ -0.06
PRPF40A-212ENST00000545856 HEATR5AQ86XA9 2040 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 TMEM229AB2RXF0 380 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 HNRNPRO43390 633 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 P04436 131 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 ELAVL4P26378 380 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 CASP3P42574 277 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 ELF3P78545 371 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 TUBA3CQ13748 450 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 MAPK14Q16539 360 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 B3GNTL1Q67FW5 361 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 FCRLBQ6BAA4 426 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 TUBA3EQ6PEY2 450 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 IL20RBQ6UXL0 311 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 C16orf47Q6ZP98 133 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 CYP4Z1Q86W10 505 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 VRK2Q86Y07 508 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 FDCSPQ8NFU4 85 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 GRHL3Q8TE85 626 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 ZG16BQ96DA0 208 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 ARSGQ96EG1 525 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 TMEM41AQ96HV5 264 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 DNAJB12Q9NXW2 375 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 KLRF1Q9NZS2 232 aa14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 CNOT11Q9UKZ1 510 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-212ENST00000545856 ANGPTL1O95841 491 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 OPN1SWP03999 348 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 FABP3P05413 133 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 THRBP10828 461 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 CD46P15529 392 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 CCL11P51671 97 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 GAS1P54826 345 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 RGS8P57771 180 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 OC90Q02509 493 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 SWT1Q5T5J6 900 aaKnown RBP14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF614Q8N883 585 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 SMYD1Q8NB12 490 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 TMEM178AQ8NBL3 297 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 PSD4Q8NDX1 1056 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 GPR32P1Q8NGA4 272 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 PHOSPHO1Q8TCT1 267 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 CANT1Q8WVQ1 401 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 TPD52L3Q96J77 140 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 NODALQ96S42 347 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 QRSL1Q9H0R6 528 aaKnown RBP14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 ADNPQ9H2P0 1102 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 KLF13Q9Y2Y9 288 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 AP4S1Q9Y587 144 aa14.66□□□□□ -0.06
PRPF40A-212ENST00000545856 EML6Q6ZMW3 1958 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 TNRC6AQ8NDV7 1962 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 ANKRD65E5RJM6 399 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 GTPBP1O00178 669 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 AP3D1O14617 1153 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 MAN1A2O60476 641 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 ENTPD5O75356 428 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 NEURL1O76050 574 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 WDPCPO95876 746 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 RHCEP18577 417 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 CD96P40200 585 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 SMIM11AP58511 58 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 SKP2Q13309 424 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 GANABQ14697 944 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 ENPP6Q6UWR7 440 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 GALNT10Q86SR1 603 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 CARM1Q86X55 608 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 LSMEM1Q8N8F7 131 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 MDS2Q8NDY4 140 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 C7orf34Q96L11 122 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 C5orf34Q96MH7 638 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 ZNF559Q9BR84 538 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 TRIM2Q9C040 744 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms