RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 COPS7AQ9UBW8 275 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 TESQ9UGI8 421 aaKnown RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 OR10H1Q9Y4A9 318 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 SPTBP11277 2137 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CLDN24A6NM45 220 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CPSF4LA6NMK7 179 aaKnown RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 OR10H3O60404 316 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CYP7B1O75881 506 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 GASTP01350 101 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 HEXBP07686 556 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ENTPD1P49961 510 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 TUBA4AP68366 448 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 PSPHP78330 225 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 CD47Q08722 323 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ILKQ13418 452 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 RAPSNQ13702 412 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 FGFBP1Q14512 234 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 NADK2Q4G0N4 442 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 PDZK1Q5T2W1 519 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 KLHL17Q6TDP4 642 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ANKRD13BQ86YJ7 626 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 PRSS58Q8IYP2 241 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ATOH1Q92858 354 aaPredicted RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 SLC38A4Q969I6 547 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ADIPOR1Q96A54 375 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 LCORQ96JN0 433 aaPredicted RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 NUDT9Q9BW91 350 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 SIAEQ9HAT2 523 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
GNE-206ENST00000543356 SEMA4GQ9NTN9 838 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 NDUFA13Q9P0J0 144 aa8.62□□□□□ -1.03
GNE-206ENST00000543356 PRR33A8MZF0 331 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ALOX12BO75342 701 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 IL33O95760 270 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 CLPTM1O96005 669 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 AGXTP21549 392 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 LCN1P31025 176 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 GGT2P36268 569 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ATP12AP54707 1039 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ESRRGP62508 458 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 RPP38P78345 283 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 PLAURQ03405 335 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 TOP3AQ13472 1001 aaPredicted RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 EBPQ15125 230 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 SF3A2Q15428 464 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 DECR1Q16698 335 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 CTU2Q2VPK5 515 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 CD300LDQ6UXZ3 194 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 LANCL3Q6ZV70 420 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 RFPL4BQ6ZWI9 263 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 SPERTQ8NA61 448 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 SUMF1Q8NBK3 374 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ADAMTS16Q8TE57 1224 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ZNF566Q969W8 418 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 GTPBP3Q969Y2 492 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 COX4I2Q96KJ9 171 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 CTRCQ99895 268 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 EDEM2Q9BV94 578 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 HOXD1Q9GZZ0 328 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 WDR54Q9H977 334 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 TMEM9BQ9NQ34 198 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 MRTO4Q9UKD2 239 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 IDSB3KWA1 339 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 AGRPO00253 132 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 MEN1O00255 615 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 TO15178 435 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ELK4P28324 431 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 EPHA2P29317 976 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 IFNGR2P38484 337 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 RFX3P48380 749 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 GABARAPL2P60520 117 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 IL5RAQ01344 420 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 NNATQ16517 81 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 C6orf141Q5SZD1 244 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 C1orf94Q6P1W5 598 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 GDF7Q7Z4P5 450 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 C9orf40Q8IXQ3 194 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 C17orf47Q8NEP4 570 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 OR4K5Q8NGD3 323 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 SLC41A3Q96GZ6 507 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 SPSB2Q99619 263 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 ZNF559Q9BR84 538 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 WWTR1Q9GZV5 400 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 NXF5Q9H1B4 397 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 CTPS2Q9NRF8 586 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 DNAJB12Q9NXW2 375 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 AKAP7Q9P0M2 348 aaPredicted RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 REV1Q9UBZ9 1251 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 NXT1Q9UKK6 140 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 PPIEQ9UNP9 301 aaKnown RBP8.61□□□□□ -1.03
GNE-206ENST00000543356 PCDHGA6Q9Y5G7 932 aa8.61□□□□□ -1.03
GNE-206ENST00000543356 A0A087WXM4 84 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 C2orf92A0A1B0GVN3 265 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 TRAPPC13A5PLN9 417 aa8.6□□□□□ -1.03
GNE-206ENST00000543356 SAGE2PA6NJ88 616 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms