RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SOX17Q9H6I2 414 aaPredicted RBP15.62■□□□□ 0.09
COPS3-212ENST00000539941 ZNF556Q9HAH1 456 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 FBXO34Q9NWN3 711 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 CBLCQ9ULV8 474 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 POFUT2Q9Y2G5 429 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 CACNA1AO00555 2505 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 OR6C76A6NM76 312 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 CENPBD1B2RD01 187 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 AP3D1O14617 1153 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 PCDH17O14917 1159 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 SLC22A1O15245 554 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 ELAVL4P26378 380 aaKnown RBP15.61■□□□□ 0.09
COPS3-212ENST00000539941 KEAP1Q14145 624 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 FGD3Q5JSP0 725 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 LAPTM4BQ86VI4 370 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 PRSS58Q8IYP2 241 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 C8orf59Q8N0T1 100 aaPredicted RBP15.61■□□□□ 0.09
COPS3-212ENST00000539941 CLIP4Q8N3C7 705 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 CMKLR1Q99788 373 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 FUZQ9BT04 418 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 GABARAPL3Q9BY60 117 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 WDR12Q9GZL7 423 aaKnown RBP15.61■□□□□ 0.09
COPS3-212ENST00000539941 NDEL1Q9GZM8 345 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 RHCGQ9UBD6 479 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 COPS7AQ9UBW8 275 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 NXT1Q9UKK6 140 aaKnown RBP15.61■□□□□ 0.09
COPS3-212ENST00000539941 OR10H1Q9Y4A9 318 aa15.61■□□□□ 0.09
COPS3-212ENST00000539941 COL27A1Q8IZC6 1860 aaPredicted RBP15.61■□□□□ 0.09
COPS3-212ENST00000539941 TRBV4-1A0A0J9YWV2 114 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 FRG2CA6NGY1 282 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 A8MUA0 341 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 MEN1O00255 615 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 MITFO75030 526 aaPredicted RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 HEXBP07686 556 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 CCNYL3P0C7X3 344 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 DRD5P21918 477 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 CBLP22681 906 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 BMXP51813 675 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 PSPHP78330 225 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 PIN1Q13526 163 aaPredicted RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 TUBA3CQ13748 450 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 ZNF141Q15928 474 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 MAPK14Q16539 360 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 ZNF770Q6IQ21 691 aaPredicted RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 THAP5Q7Z6K1 395 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 GALNT5Q7Z7M9 940 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 OR1N1Q8NGS0 311 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 STRADBQ9C0K7 418 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 KCNE5Q9UJ90 142 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 CDHR4A6H8M9 788 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 IDSB3KWA1 339 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 NPIPB9F8W1W9 429 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 AGRPO00253 132 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 PEX12O00623 359 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 BCKDKO14874 412 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 GDF9O60383 454 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 FMO6PO60774 539 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 OR5F1O95221 314 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 ADAP00813 363 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 IGKV1D-16P01601 117 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 LCN1P31025 176 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 TAS2R41P59536 307 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 DECR1Q16698 335 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 MRPL2Q5T653 305 aaKnown RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 RANBP3LQ86VV4 465 aaPredicted RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 GRAMD2AQ8IUY3 354 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 PARP8Q8N3A8 854 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 BCORP1Q8N888 145 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 SETD9Q8NE22 299 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 TOR1AIP2Q8NFQ8 470 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 OR4N2Q8NGD1 307 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 METTL21AQ8WXB1 218 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 S100ZQ8WXG8 99 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 DIO2Q92813 273 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 LCORQ96JN0 433 aaPredicted RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 MUS81Q96NY9 551 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 DCUN1D5Q9BTE7 237 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 RIBC2Q9H4K1 309 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 WDR54Q9H977 334 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 RLIMQ9NVW2 624 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 MRTO4Q9UKD2 239 aaKnown RBP15.6■□□□□ 0.09
COPS3-212ENST00000539941 MGAT4BQ9UQ53 548 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 HSPE1-MOB4S4R3N1 261 aa15.6■□□□□ 0.09
COPS3-212ENST00000539941 CENPVL1A0A0U1RR11 272 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 E9PQ18 207 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 RGS13O14921 159 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ALOX12BO75342 701 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 CLIC3O95833 236 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 KLK3P07288 261 aaPredicted RBP15.59■□□□□ 0.09
COPS3-212ENST00000539941 CCL4P13236 92 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 NAT1P18440 290 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 CCNA2P20248 432 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 RYKP34925 604 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ATP12AP54707 1039 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 TPD52P55327 224 aaPredicted RBP15.59■□□□□ 0.09
COPS3-212ENST00000539941 IL1RL1Q01638 556 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ST3GAL3Q11203 375 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 NPRL3Q12980 569 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 TRAM2Q15035 370 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ZNF691Q5VV52 312 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms