RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 GGHQ92820 318 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 NT5C3BQ969T7 300 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 PGAM5Q96HS1 289 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 CPPED1Q9BRF8 314 aaPredicted RBP13.67□□□□□ -0.22
CACNB1-206ENST00000539338 MYEF2Q9P2K5 600 aaKnown RBP13.67□□□□□ -0.22
CACNB1-206ENST00000539338 RGS6P49758 472 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 AIMP2Q13155 320 aaKnown RBP13.67□□□□□ -0.22
CACNB1-206ENST00000539338 LEXMQ3ZCV2 418 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 FAM69BQ5VUD6 431 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 SDR9C7Q8NEX9 313 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 OR6Q1Q8NGQ2 317 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF583Q96ND8 569 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 ALOXE3Q9BYJ1 711 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 DDX31Q9H8H2 851 aaKnown RBP13.67□□□□□ -0.22
CACNB1-206ENST00000539338 EFCAB7A8K855 629 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 RDH16O75452 317 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 GBX1Q14549 363 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 RAB11BQ15907 218 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 FRMPD2BQ6IN97 320 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 Q6ZSR9 355 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 SLC35F2Q8IXU6 374 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 PRRC1Q96M27 445 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 CWH43Q9H720 699 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 ITGB4P16144 1822 aa13.67□□□□□ -0.22
CACNB1-206ENST00000539338 HHLA1C9JL84 531 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 SGK494L7N484 410 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 UQCRC1P31930 480 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 P2RY2P41231 377 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PTH2RP49190 550 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 FAM78AQ5JUQ0 283 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 CCNJQ5T5M9 372 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 RPL3LQ92901 407 aaKnown RBP13.66□□□□□ -0.22
CACNB1-206ENST00000539338 TRMT2BQ96GJ1 504 aaKnown RBP13.66□□□□□ -0.22
CACNB1-206ENST00000539338 IER3IP1Q9Y5U9 82 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 A0A1B0GVC2 190 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 A6NIN4 97 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PRAMEF2O60811 474 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 CSNK1DP48730 415 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PRLHRP49683 370 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 CTBP2P56545 445 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 COL28A1Q2UY09 1125 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 BEST3Q8N1M1 668 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 FAM183AA6NL82 134 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 GYPBP06028 91 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 SLC6A11P48066 632 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 VRK2Q86Y07 508 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 CD300LFQ8TDQ1 290 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 FER1L6-AS2Q96M78 137 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 TRAV18A0A075B6X5 111 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 CASC3O15234 703 aaKnown RBP13.66□□□□□ -0.22
CACNB1-206ENST00000539338 AMY2BP19961 511 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 LRIF1Q5T3J3 769 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 MAMDC2Q7Z304 686 aaPredicted RBP13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PRICKLE2Q7Z3G6 844 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 UBQLNLQ8IYU4 475 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PRR22Q8IZ63 422 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 ELMOD2Q8IZ81 293 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PITX2Q99697 317 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 ACTR10Q9NZ32 417 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 KLHL42Q9P2K6 505 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 POU2F3Q9UKI9 436 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 TAF1P21675 1872 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 HIDE1A8MVS5 230 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 EEF1E1-BLOC1S5C9J1V9 151 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 FARS2O95363 451 aaKnown RBP13.66□□□□□ -0.22
CACNB1-206ENST00000539338 AKR1C4P17516 323 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 ENDOUP21128 410 aaKnown RBP13.66□□□□□ -0.22
CACNB1-206ENST00000539338 PITPNBP48739 271 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 SLC7A9P82251 487 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 GRM7Q14831 915 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 RAET1LQ5VY80 246 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 SLC18B1Q6NT16 456 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 DEDD2Q8WXF8 326 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 KLHL9Q9P2J3 617 aa13.66□□□□□ -0.22
CACNB1-206ENST00000539338 ACOT8O14734 319 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF84P51523 738 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 C1orf53Q5VUE5 145 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 SPRED1Q7Z699 444 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 URM1Q9BTM9 101 aaKnown RBP13.65□□□□□ -0.22
CACNB1-206ENST00000539338 A0A0A6YYC8 382 aaPredicted RBP13.65□□□□□ -0.22
CACNB1-206ENST00000539338 VSTM2BA6NLU5 285 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 I3L1I5 382 aaPredicted RBP13.65□□□□□ -0.22
CACNB1-206ENST00000539338 AHRP35869 848 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 PSMB10P40306 273 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 CXCR4P61073 352 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 SPEM2Q0P670 501 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 SEMA3BQ13214 749 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 FTMTQ8N4E7 242 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 GAB3Q8WWW8 586 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 SLC22A12Q96S37 553 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 SLC25A18Q9H1K4 315 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 COQ3Q9NZJ6 369 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 AMY2AP04746 511 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 FUT1P19526 365 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 ALG10Q5BKT4 473 aa13.65□□□□□ -0.22
CACNB1-206ENST00000539338 MTFR2Q6P444 385 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms