RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CDH24Q86UP0 819 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 UBQLNLQ8IYU4 475 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 VPS37AQ8NEZ2 397 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 MIPOL1Q8TD10 442 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 OTUB1Q96FW1 271 aaPredicted RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 PPP1R36Q96LQ0 422 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 FBXO34Q9NWN3 711 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 PAQR5Q9NXK6 330 aaPredicted RBP10.43□□□□□ -0.74
RTN3-209ENST00000538995 NKIRAS1Q9NYS0 192 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 PACSIN3Q9UKS6 424 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 PCDHGB4Q9UN71 923 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 ZNF337Q9Y3M9 751 aa10.43□□□□□ -0.74
RTN3-209ENST00000538995 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 RNF103-CHMP3A0A140T963 221 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 PRSS51A0A1B0GVH4 220 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 A0A1W2PNV4 684 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 E9PBE3 544 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 NPIPB9F8W1W9 429 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 H3BML4 177 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 H3BNH8 94 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 HDAC3O15379 428 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 TGM6O95932 706 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 AGR2O95994 175 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 ELK4P28324 431 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 EIF1P41567 113 aaKnown RBP10.42□□□□□ -0.74
RTN3-209ENST00000538995 CLDN15P56746 228 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 MAGOHP61326 146 aaKnown RBP10.42□□□□□ -0.74
RTN3-209ENST00000538995 FOXF2Q12947 444 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 CD226Q15762 336 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 PLPPR5Q32ZL2 321 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 KLHL26Q53HC5 615 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 P4HA3Q7Z4N8 544 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 SPATA19Q7Z5L4 167 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 TMEM200AQ86VY9 491 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 GCNT2Q8N0V5 402 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 CHDHQ8NE62 594 aaPredicted RBP10.42□□□□□ -0.74
RTN3-209ENST00000538995 OR4A15Q8NGL6 344 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 OR5AK3PQ8NH89 298 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 B4GALNT2Q8NHY0 566 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 NUDT8Q8WV74 236 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 OIT3Q8WWZ8 545 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 INTS12Q96CB8 462 aaKnown RBP10.42□□□□□ -0.74
RTN3-209ENST00000538995 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 NMUR2Q9GZQ4 415 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 TMBIM4Q9HC24 238 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 MED17Q9NVC6 651 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 PNPOQ9NVS9 261 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 AIG1Q9NVV5 245 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 CRIM1Q9NZV1 1036 aa10.42□□□□□ -0.74
RTN3-209ENST00000538995 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 FAM221AA4D161 298 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 TUBAL3A6NHL2 446 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 SDHDO14521 159 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 MSTNO14793 375 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 KLF11O14901 512 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 SEC14L5O43304 696 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 SCN2BO60939 215 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 CTAG2O75638 210 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 TNFSF13O75888 250 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 GUSBP08236 651 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 UQCRC2P22695 453 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 ME2P23368 584 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 PSMA4P25789 261 aaKnown RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 ADH6P28332 368 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 CPA2P48052 419 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 AGFG1P52594 562 aaKnown RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 SUCLG1P53597 346 aaKnown RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 ATP12AP54707 1039 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 CLDN20P56880 219 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 RAC1P63000 192 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 TXNL4AP83876 142 aaKnown RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 LRRC74AQ0VAA2 488 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 CASP8Q14790 479 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 DAZAP2Q15038 168 aaPredicted RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 C6orf120Q7Z4R8 191 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 GGNQ86UU5 652 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 WDR75Q8IWA0 830 aaKnown RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 ZZZ3Q8IYH5 903 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 CLECL1Q8IZS7 167 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 GATSQ8NAP1 163 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 OR5M1Q8NGP8 315 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 MGARPQ8TDB4 240 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 SH3YL1Q96HL8 342 aaPredicted RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 SLC35G5Q96KT7 338 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 DOCK7Q96N67 2140 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 RBM24Q9BX46 236 aaKnown RBP10.41□□□□□ -0.74
RTN3-209ENST00000538995 PINK1Q9BXM7 581 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 RNF122Q9H9V4 155 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 EXD2Q9NVH0 621 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 VDAC3Q9Y277 283 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 KCNE3Q9Y6H6 103 aa10.41□□□□□ -0.74
RTN3-209ENST00000538995 KIAA1549Q9HCM3 1950 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 A6NNC1 897 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 A8MXE2 369 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 H0YC42 278 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 ADAMDEC1O15204 470 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 GMFGO60234 142 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 ALDOCP09972 364 aaKnown RBP10.4□□□□□ -0.74
RTN3-209ENST00000538995 LINGO3P0C6S8 592 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms