RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 PPP3CBP16298 524 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 EFNA1P20827 205 aaPredicted RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 MAPK1P28482 360 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 SLC6A8P48029 635 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 RAC1P63000 192 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 POU6F2P78424 691 aaPredicted RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 PLPPR5Q32ZL2 321 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 PDSS1Q5T2R2 415 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ZCCHC12Q6PEW1 402 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 LRIG3Q6UXM1 1119 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ESPNLQ6ZVH7 1005 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ZAR1Q86SH2 424 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 STK32CQ86UX6 486 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 OR2V1Q8NHB1 315 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ACTRT2Q8TDY3 377 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 TWIST2Q8WVJ9 160 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 MTERF3Q96E29 417 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 GIMAP5Q96F15 307 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 OTUB1Q96FW1 271 aaPredicted RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 MARK4Q96L34 752 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 GATA5Q9BWX5 397 aaPredicted RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 TUBB1Q9H4B7 451 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 PLSCR4Q9NRQ2 329 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 UBQLN4Q9NRR5 601 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 GLRX2Q9NS18 164 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ZCCHC3Q9NUD5 404 aaKnown RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 MED17Q9NVC6 651 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 CLEC4AQ9UMR7 237 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 MAP1AP78559 2803 aaPredicted RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 RAI1Q7Z5J4 1906 aaPredicted RBP8.68□□□□□ -1.02
CHD4-207ENST00000537634 DSCAMO60469 2012 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 ARID1AO14497 2285 aa8.68□□□□□ -1.02
CHD4-207ENST00000537634 A0A1W2PQD3 144 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 TMEM233B4DJY2 109 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 TNFSF11O14788 317 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 PIP5K1BO14986 540 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 SCAMP2O15127 329 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 ADAMDEC1O15204 470 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 OPN1LWP04000 364 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 HMGN2P05204 90 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 HEXAP06865 529 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 BCKDHAP12694 445 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 ATP6V1C1P21283 382 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 RPL3P39023 403 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 LASP1Q14847 261 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 CD226Q15762 336 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 CTU2Q2VPK5 515 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 BEX5Q5H9J7 111 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 CCNJQ5T5M9 372 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 CPTPQ5TA50 214 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 HBMQ6B0K9 141 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 BEND4Q6ZU67 534 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 YTHDF3Q7Z739 585 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 HEATR5AQ86XA9 2040 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 ZNF527Q8NB42 609 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 LRRN4CLQ8ND94 238 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 FAM110BQ8TC76 370 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 FAM120BQ96EK7 910 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 PERPQ96FX8 193 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 C16orf58Q96GQ5 468 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 REXO5Q96IC2 774 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 APOPT1Q96IL0 206 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 ADGRG7Q96K78 797 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 COX4I2Q96KJ9 171 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 PPP3R2Q96LZ3 170 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 KLHL15Q96M94 604 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 Q96MF0 132 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 STACQ99469 402 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 NPAS1Q99742 590 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 BTBD2Q9BX70 525 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 EML4Q9HC35 981 aaKnown RBP8.67□□□□□ -1.02
CHD4-207ENST00000537634 DUSP22Q9NRW4 184 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 FBXO34Q9NWN3 711 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 MKS1Q9NXB0 559 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 TRAF6Q9Y4K3 522 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 SNX8Q9Y5X2 465 aa8.67□□□□□ -1.02
CHD4-207ENST00000537634 A0A0J9YW62 118 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.66□□□□□ -1.02
CHD4-207ENST00000537634 TLDC2A0PJX2 215 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 H3BNH8 94 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 H7C1Q1 480 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 NPHS1O60500 1241 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 NUDT14O95848 222 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 TUBBP07437 444 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 CHRNGP07510 517 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 FGF4P08620 206 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 KRT16P08779 473 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 PABPC4LP0CB38 370 aaKnown RBP8.66□□□□□ -1.02
CHD4-207ENST00000537634 IL11P20809 199 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 PSMA4P25789 261 aaKnown RBP8.66□□□□□ -1.02
CHD4-207ENST00000537634 LOXP28300 417 aaPredicted RBP8.66□□□□□ -1.02
CHD4-207ENST00000537634 ELK4P28324 431 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 AGTR1P30556 359 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 ALDH3A1P30838 453 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 SFTPDP35247 375 aa8.66□□□□□ -1.02
CHD4-207ENST00000537634 EIF1P41567 113 aaKnown RBP8.66□□□□□ -1.02
CHD4-207ENST00000537634 NR1H2P55055 460 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms