RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CDHR4A6H8M9 788 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 ERICH4A6NGS2 130 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 GTPBP1O00178 669 aaKnown RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 SLC25A12O75746 678 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 NEURL1O76050 574 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 ZIC2O95409 532 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 LGI1O95970 557 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 SP1P08047 785 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 UQCRBP14927 111 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 SLC6A8P48029 635 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 MS4A2Q01362 244 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 KCNC4Q03721 635 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 CYBRD1Q53TN4 286 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 PDZK1Q5T2W1 519 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 C1orf146Q5VVC0 180 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF550Q7Z398 422 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 ZAR1Q86SH2 424 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 FAM98AQ8NCA5 519 aaKnown RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 FAM156AQ8NDB6 213 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 OR10G3Q8NGC4 313 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 GRHL3Q8TE85 626 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 NR4A3Q92570 626 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 TAMM41Q96BW9 452 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 CCDC124Q96CT7 223 aaKnown RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 ZG16BQ96DA0 208 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 TMEM41AQ96HV5 264 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 NODALQ96S42 347 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 FAM173AQ9BQD7 235 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 OSBPL11Q9BXB4 747 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 POLR2J2Q9GZM3 115 aaKnown RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 LAT2Q9GZY6 243 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 POLR2J3Q9H1A7 115 aaKnown RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 YY1AP1Q9H869 796 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 KLRF1Q9NZS2 232 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 USP22Q9UPT9 525 aa14.87□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF443Q9Y2A4 671 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-205ENST00000535927 FAAHO00519 579 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF264O43296 627 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 FMO6PO60774 539 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 ANGPTL1O95841 491 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 SERPINA1P01009 418 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 CSTAP01040 98 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 GPIP06744 558 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 AQP1P29972 269 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 KCNJ2P63252 427 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 EEF1A1P68104 462 aaKnown RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 INAQ16352 499 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 LRRC23Q53EV4 343 aaPredicted RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 RPS26P11Q5JNZ5 115 aaPredicted RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF468Q5VIY5 522 aaPredicted RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 FNDC7Q5VTL7 733 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 RPUSD3Q6P087 351 aaKnown RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 FAM71CQ8NEG0 241 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 UTP4Q969X6 686 aaKnown RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 SCMH1Q96GD3 660 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 PYURFQ96I23 114 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 BBC3Q96PG8 261 aaPredicted RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 PTGES2Q9H7Z7 377 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 KCNE5Q9UJ90 142 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 PACSIN3Q9UKS6 424 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 BOKQ9UMX3 212 aaPredicted RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 MRPS18CQ9Y3D5 142 aaKnown RBP14.86□□□□□ -0.03
VAMP1-205ENST00000535927 WIF1Q9Y5W5 379 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 CELSR3Q9NYQ7 3312 aa14.86□□□□□ -0.03
VAMP1-205ENST00000535927 NME2P1O60361 137 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 FESP07332 822 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 UBL4AP11441 157 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 ITGA2P17301 1181 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 CD247P20963 164 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 NME2P22392 152 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 IFNA8P32881 189 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 GAS1P54826 345 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 ACTR3P61158 418 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 DMTNQ08495 405 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 KCNAB2Q13303 367 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 MAPK14Q16539 360 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 FAM98BQ52LJ0 330 aaKnown RBP14.85□□□□□ -0.03
VAMP1-205ENST00000535927 IFI44LQ53G44 452 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 Q6ZS92 163 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 ZNF227Q86WZ6 799 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 SPPL2CQ8IUH8 684 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 AMER2Q8N7J2 671 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 OR5M3Q8NGP4 307 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 PHOSPHO1Q8TCT1 267 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 GEMIN6Q8WXD5 167 aaKnown RBP14.85□□□□□ -0.03
VAMP1-205ENST00000535927 EXTL1Q92935 676 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 ARSGQ96EG1 525 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 DUS3LQ96G46 650 aaKnown RBP14.85□□□□□ -0.03
VAMP1-205ENST00000535927 ABHD17AQ96GS6 310 aa14.85□□□□□ -0.03
VAMP1-205ENST00000535927 TCRBV3S1A0A5B6 114 aa14.84□□□□□ -0.03
VAMP1-205ENST00000535927 TRIM3O75382 744 aaPredicted RBP14.84□□□□□ -0.03
VAMP1-205ENST00000535927 CBR3O75828 277 aa14.84□□□□□ -0.03
VAMP1-205ENST00000535927 NCK1P16333 377 aa14.84□□□□□ -0.03
VAMP1-205ENST00000535927 PSMA4P25789 261 aaKnown RBP14.84□□□□□ -0.03
VAMP1-205ENST00000535927 MSX2P35548 267 aaPredicted RBP14.84□□□□□ -0.03
VAMP1-205ENST00000535927 P2RX1P51575 399 aa14.84□□□□□ -0.03
VAMP1-205ENST00000535927 CHRNB3Q05901 458 aa14.84□□□□□ -0.03
VAMP1-205ENST00000535927 RAPSNQ13702 412 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms