RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ACSM1Q08AH1 577 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ELAVL2Q12926 359 aaKnown RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 SCGB2A2Q13296 93 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 MAPK11Q15759 364 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 LPAL2Q16609 132 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 KLHL26Q53HC5 615 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 C1orf220Q5T0J3 134 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SLX4IPQ5VYV7 408 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 METTL21CQ5VZV1 264 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 RWDD4Q6NW29 188 aaKnown RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 UGT2A3Q6UWM9 527 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 LRRC74BQ6ZQY2 392 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 NET1Q7Z628 596 aaPredicted RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 GTSCR1Q86UQ5 136 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SLC51BQ86UW2 128 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 CBWD2Q8IUF1 395 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ERI1Q8IV48 349 aaKnown RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 C12orf56Q8IXR9 622 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 LYG1Q8N1E2 194 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 FBXW8Q8N3Y1 598 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SFRP1Q8N474 314 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 CSGALNACT2Q8N6G5 542 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ATP6V0D2Q8N8Y2 350 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OR7G1Q8NGA0 311 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OR11H4Q8NGC9 324 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OR5B17Q8NGF7 314 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OR13C3Q8NGS6 347 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 DYDC1Q8WWB3 177 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 CKAP2Q8WWK9 683 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SLC5A11Q8WWX8 675 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 RAB7BQ96AH8 199 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 TMEM186Q96B77 213 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SPSB1Q96BD6 273 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 C14orf79Q96F83 325 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 PAGE5Q96GU1 130 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ANKRD36BP1Q96IX9 119 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 MAGED4Q96JG8 741 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 GSDMAQ96QA5 445 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ACCSQ96QU6 501 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 PKMYT1Q99640 499 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 CHP1Q99653 195 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ZNF184Q99676 751 aaPredicted RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 SSX3Q99909 188 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SYT11Q9BT88 431 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 TBCDQ9BTW9 1192 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OR2B2Q9GZK3 357 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ASB7Q9H672 318 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 RPF1Q9H9Y2 349 aaKnown RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 PLGRKTQ9HBL7 147 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SAR1AQ9NR31 198 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.96□□□□□ -1.94
USP48-215ENST00000534705 AGPAT3Q9NRZ7 376 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ARMC1Q9NVT9 282 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 DMAC2Q9NW81 257 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 EURLQ9NYK6 297 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OR6C2Q9NZP2 312 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ANKMY1Q9P2S6 941 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 UVRAGQ9P2Y5 699 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SPASTQ9UBP0 616 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 TRIM10Q9UDY6 481 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 ASIC3Q9UHC3 531 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 PCSK1NQ9UHG2 260 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 UBQLN1Q9UMX0 589 aaKnown RBP2.96□□□□□ -1.94
USP48-215ENST00000534705 STUB1Q9UNE7 303 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 IFT52Q9Y366 437 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 U3KQV3 271 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 PLXNA2O75051 1894 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 GON4LQ3T8J9 2241 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 CFAP54Q96N23 3096 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 SPTBN4Q9H254 2564 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 OTOGLQ3ZCN5 2332 aa2.96□□□□□ -1.94
USP48-215ENST00000534705 DCHS1Q96JQ0 3298 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CLUHO75153 1309 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CACNA1EQ15878 2313 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MTMR11A4FU01 709 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 NEMP2A6NFY4 417 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 SHISA7A6NL88 538 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 OR5K4A6NMS3 321 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 BTNL10A8MVZ5 291 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TRIM77I1YAP6 450 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MAGEB3O15480 346 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 DENRO43583 198 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 HCRTO43612 131 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 SCO2O43819 266 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 SULT1C4O75897 302 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CDK2AP2O75956 126 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 AKR7A3O95154 331 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 PGLSO95336 258 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 FGFR1OPO95684 399 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 SLC16A8O95907 504 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TGFAP01135 160 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 OR4Q2P0C623 313 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CTRB1P17538 263 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 VCLP18206 1134 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CDH3P22223 829 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 PTPN4P29074 926 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 HOXA9P31269 272 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CHRNA3P32297 505 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CCR2P41597 374 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 RPL5P46777 297 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms