RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 SNIP1Q8TAD8 396 aaKnown RBP9.24□□□□□ -0.93
RPS3-219ENST00000534440 NUBPLQ8TB37 319 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 CNOT9Q92600 299 aaKnown RBP9.24□□□□□ -0.93
RPS3-219ENST00000534440 DIO2Q92813 273 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 NKD1Q969G9 470 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 EME1Q96AY2 570 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 NXPE2Q96DL1 559 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 NAF1Q96HR8 494 aaKnown RBP9.24□□□□□ -0.93
RPS3-219ENST00000534440 DHRS1Q96LJ7 313 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 PIP5K1AQ99755 562 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 G6PC3Q9BUM1 346 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 BDH2Q9BUT1 245 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 RTN4RQ9BZR6 473 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 ZNF160Q9HCG1 818 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 CTPS2Q9NRF8 586 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 MAN2C1Q9NTJ4 1040 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
RPS3-219ENST00000534440 RHCGQ9UBD6 479 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 FBXL4Q9UKA2 621 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 A4GNTQ9UNA3 340 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 IFT52Q9Y366 437 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 SAMHD1Q9Y3Z3 626 aaKnown RBP9.24□□□□□ -0.93
RPS3-219ENST00000534440 LYVE1Q9Y5Y7 322 aa9.24□□□□□ -0.93
RPS3-219ENST00000534440 NSG1A0A0A6YYJ2 146 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 TRBV4-1A0A0J9YWV2 114 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 WWP2O00308 870 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 PCDH17O14917 1159 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 UGT2B11O75310 529 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 SOX30O94993 753 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 OXSR1O95747 527 aaPredicted RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 IGHEP01854 428 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 THY1P04216 161 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 GKN3PP0CG01 181 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 ITGAMP11215 1152 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 IL7RP16871 459 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 RHCEP18577 417 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 FPR1P21462 350 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 PRKACGP22612 351 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 RBMS1P29558 406 aaKnown RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 ST13P50502 369 aaKnown RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 ATP12AP54707 1039 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 CDH12P55289 794 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 RGS8P57771 180 aaPredicted RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 RPS15P62841 145 aaKnown RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 SPIBQ01892 262 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 C19orf57Q0VDD7 668 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 LARS2Q15031 903 aaKnown RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 EXOC3L2Q2M3D2 409 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 KLHL26Q53HC5 615 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 EIPR1Q53HC9 387 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 OTUD3Q5T2D3 398 aaPredicted RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 PPP4R4Q6NUP7 873 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 SHQ1Q6PI26 577 aaKnown RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 ZNF614Q8N883 585 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 GATSQ8NAP1 163 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 FAM71CQ8NEG0 241 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 OR8K3Q8NH51 312 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 OR5K1Q8NHB7 308 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 ADAMTS17Q8TE56 1095 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 TP53INP1Q96A56 240 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 HSPBAP1Q96EW2 488 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 ZNF347Q96SE7 839 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 ADOQ96SZ5 270 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 EPYCQ99645 322 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 ZNF184Q99676 751 aaPredicted RBP9.23□□□□□ -0.93
RPS3-219ENST00000534440 FUZQ9BT04 418 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 C9orf16Q9BUW7 83 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 GABARAPL1Q9H0R8 117 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 REEP1Q9H902 201 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 SMURF2Q9HAU4 748 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 MMP25Q9NPA2 562 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 ACER3Q9NUN7 267 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 SLC9A8Q9Y2E8 581 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 PCDHGA6Q9Y5G7 932 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 HRH3Q9Y5N1 445 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 NINQ8N4C6 2090 aa9.23□□□□□ -0.93
RPS3-219ENST00000534440 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 ZNF462Q96JM2 2506 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 SERINC4A6NH21 518 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 EIF4E1BA6NMX2 242 aaKnown RBP9.22□□□□□ -0.93
RPS3-219ENST00000534440 GNGT2O14610 69 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 ADAMDEC1O15204 470 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 E2F6O75461 281 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 REM1O75628 298 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 ZFAND5O76080 213 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
RPS3-219ENST00000534440 LYPD3O95274 346 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 HPP00738 406 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 CD63P08962 238 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 LIFP15018 202 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 ITGA2P17301 1181 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 CD82P27701 267 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 IL12BP29460 328 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 DNAJA1P31689 397 aaKnown RBP9.22□□□□□ -0.93
RPS3-219ENST00000534440 LSM11P83369 360 aaKnown RBP eCLIP9.22□□□□□ -0.93
RPS3-219ENST00000534440 PPP2R2BQ00005 443 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 PIN1Q13526 163 aaPredicted RBP9.22□□□□□ -0.93
RPS3-219ENST00000534440 ATP1A4Q13733 1029 aa9.22□□□□□ -0.93
RPS3-219ENST00000534440 DAG1Q14118 895 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms