RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RNF6Q9Y252 685 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 RPH3AQ9Y2J0 694 aaPredicted RBP18.52■□□□□ 0.56
CCS-208ENST00000533244 CACNA1CQ13936 2221 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 UNC79Q9P2D8 2635 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 KIAA0513O60268 411 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 CLDN14O95500 239 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 EPPINO95925 133 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 ZNF141Q15928 474 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 BCL2A1Q16548 175 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 ZNF630Q2M218 657 aaPredicted RBP18.51■□□□□ 0.55
CCS-208ENST00000533244 ATAD3BQ5T9A4 648 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 ADGRE4PQ86SQ3 457 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 ZPLD1Q8TCW7 415 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 OIT3Q8WWZ8 545 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 ROPN1LQ96C74 230 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 SDCCAG3Q96C92 435 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 PAIP1Q9H074 479 aaKnown RBP18.51■□□□□ 0.55
CCS-208ENST00000533244 ALKBH4Q9NXW9 302 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 COQ3Q9NZJ6 369 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 CAMK2AQ9UQM7 478 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 DTNAQ9Y4J8 743 aa18.51■□□□□ 0.55
CCS-208ENST00000533244 A0A087WZY1 265 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 OR2M5A3KFT3 312 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 KRT75O95678 551 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 ZNF708P17019 499 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 ADH7P40394 386 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 CLDN18P56856 261 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 GUCY1A3Q02108 690 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 ZNF117Q03924 483 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 GTDC1Q4AE62 458 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 COX20Q5RI15 118 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 RIPPLY2Q5TAB7 128 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 NSUN5P2Q63ZY6 315 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 HIST2H2BCQ6DN03 193 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 TYW3Q6IPR3 259 aaKnown RBP18.5■□□□□ 0.55
CCS-208ENST00000533244 CGB2Q6NT52 195 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 SLC2A7Q6PXP3 512 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 ARSKQ6UWY0 536 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 OLIG3Q7RTU3 272 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 ASB5Q8WWX0 329 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 SPDL1Q96EA4 605 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 KLHDC3Q9BQ90 382 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 CCDC167Q9P0B6 97 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 MKLN1Q9UL63 735 aa18.5■□□□□ 0.55
CCS-208ENST00000533244 A0A0G2JND7 137 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 CENPVL1A0A0U1RR11 272 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 C7orf72A4D263 438 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 CD8B2A6NJW9 211 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 KDM4EB2RXH2 506 aaPredicted RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 FAM47E-STBD1D6RA91 191 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 LINC01387J3KSC0 135 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 OIP5O43482 229 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 TNFRSF21O75509 655 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 UGT2B17O75795 530 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 CAPN3P20807 821 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 TCEA1P23193 301 aaKnown RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 CHRNB4P30926 498 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 STARP49675 285 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 ANXA11P50995 505 aaKnown RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 SF3B4Q15427 424 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCS-208ENST00000533244 GPR68Q15743 365 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 LRIF1Q5T3J3 769 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 RAET1LQ5VY80 246 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 METTL21CQ5VZV1 264 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 FRRS1Q6ZNA5 592 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 LACC1Q8IV20 430 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 B4GALNT2Q8NHY0 566 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 PNPT1Q8TCS8 783 aaKnown RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 PHOSPHO1Q8TCT1 267 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 PIGQQ9BRB3 760 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 TPT1P8Q9HAU6 139 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 FGFR1OP2Q9NVK5 253 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 ICAM5Q9UMF0 924 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 LIPT1Q9Y234 373 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 WDR45Q9Y484 360 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 A0A0G2JNJ9 132 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 H3BNH8 94 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 HCRTR2O43614 444 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 TOXO94900 526 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 ANP32DO95626 131 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 CD1EP15812 388 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 ZNF17P17021 662 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 COL8A1P27658 744 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 SUMO3P55854 103 aaPredicted RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 PLPPR5Q32ZL2 321 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 AGKQ53H12 422 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 C6orf10Q5SRN2 563 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 PDZK1Q5T2W1 519 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 CBLN3Q6UW01 205 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 LILRB4Q8NHJ6 448 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 SH3YL1Q96HL8 342 aaPredicted RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 TRNT1Q96Q11 434 aaKnown RBP18.49■□□□□ 0.55
CCS-208ENST00000533244 UCN2Q96RP3 112 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 TUBA1CQ9BQE3 449 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 RABEP2Q9H5N1 569 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 MED17Q9NVC6 651 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 Q9UFV3 132 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 TRIM33Q9UPN9 1127 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 ZNF337Q9Y3M9 751 aa18.49■□□□□ 0.55
CCS-208ENST00000533244 PCDHB14Q9Y5E9 798 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms