RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 LRRC23Q53EV4 343 aaPredicted RBP14.01□□□□□ -0.17
LSM1-203ENST00000520755 PRR30Q53SZ7 412 aaPredicted RBP14.01□□□□□ -0.17
LSM1-203ENST00000520755 PDZK1Q5T2W1 519 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 INTS11Q5TA45 600 aaKnown RBP14.01□□□□□ -0.17
LSM1-203ENST00000520755 FNDC7Q5VTL7 733 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 RPUSD3Q6P087 351 aaKnown RBP14.01□□□□□ -0.17
LSM1-203ENST00000520755 CYP2R1Q6VVX0 501 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 ZNF771Q7L3S4 317 aaPredicted RBP14.01□□□□□ -0.17
LSM1-203ENST00000520755 VRK2Q86Y07 508 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 CISD2Q8N5K1 135 aaKnown RBP14.01□□□□□ -0.17
LSM1-203ENST00000520755 POGLUT1Q8NBL1 392 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 TNIP2Q8NFZ5 429 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 GPR32P1Q8NGA4 272 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 GRHL3Q8TE85 626 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 WDR60Q8WVS4 1066 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 NTNG2Q96CW9 530 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 MUC13Q9H3R2 512 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 METTL7AQ9H8H3 244 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 GORASP2Q9H8Y8 452 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 KLRF1Q9NZS2 232 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 ACTR3BQ9P1U1 418 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 COL6A6A6NMZ7 2263 aa14.01□□□□□ -0.17
LSM1-203ENST00000520755 TCRBV5S2A0A599 114 aa14□□□□□ -0.17
LSM1-203ENST00000520755 PRAMEF25A6NGN4 478 aa14□□□□□ -0.17
LSM1-203ENST00000520755 B4DXG7 233 aa14□□□□□ -0.17
LSM1-203ENST00000520755 B8ZZF3 427 aa14□□□□□ -0.17
LSM1-203ENST00000520755 M0QX08 132 aa14□□□□□ -0.17
LSM1-203ENST00000520755 TPST1O60507 370 aa14□□□□□ -0.17
LSM1-203ENST00000520755 PABPC4LP0CB38 370 aaKnown RBP14□□□□□ -0.17
LSM1-203ENST00000520755 CNR1P21554 472 aa14□□□□□ -0.17
LSM1-203ENST00000520755 TBXA2RP21731 343 aa14□□□□□ -0.17
LSM1-203ENST00000520755 EVI2BP34910 448 aa14□□□□□ -0.17
LSM1-203ENST00000520755 RFC3P40938 356 aa14□□□□□ -0.17
LSM1-203ENST00000520755 CASP3P42574 277 aa14□□□□□ -0.17
LSM1-203ENST00000520755 GAS1P54826 345 aa14□□□□□ -0.17
LSM1-203ENST00000520755 MLLT10P55197 1068 aa14□□□□□ -0.17
LSM1-203ENST00000520755 FGFBP1Q14512 234 aa14□□□□□ -0.17
LSM1-203ENST00000520755 CD226Q15762 336 aa14□□□□□ -0.17
LSM1-203ENST00000520755 INAQ16352 499 aa14□□□□□ -0.17
LSM1-203ENST00000520755 GLIPR1L2Q4G1C9 344 aa14□□□□□ -0.17
LSM1-203ENST00000520755 KLHL26Q53HC5 615 aa14□□□□□ -0.17
LSM1-203ENST00000520755 ZNF836Q6ZNA1 936 aa14□□□□□ -0.17
LSM1-203ENST00000520755 PRICKLE2Q7Z3G6 844 aa14□□□□□ -0.17
LSM1-203ENST00000520755 PATL1Q86TB9 770 aaKnown RBP14□□□□□ -0.17
LSM1-203ENST00000520755 FAM86B1Q8N7N1 296 aa14□□□□□ -0.17
LSM1-203ENST00000520755 OR2M7Q8NG81 312 aa14□□□□□ -0.17
LSM1-203ENST00000520755 FAM162AQ96A26 154 aa14□□□□□ -0.17
LSM1-203ENST00000520755 TAAR6Q96RI8 345 aa14□□□□□ -0.17
LSM1-203ENST00000520755 SECISBP2Q96T21 854 aaKnown RBP14□□□□□ -0.17
LSM1-203ENST00000520755 FAM173AQ9BQD7 235 aa14□□□□□ -0.17
LSM1-203ENST00000520755 DOHHQ9BU89 302 aa14□□□□□ -0.17
LSM1-203ENST00000520755 MTHFD2LQ9H903 347 aaPredicted RBP14□□□□□ -0.17
LSM1-203ENST00000520755 PROK2Q9HC23 129 aa14□□□□□ -0.17
LSM1-203ENST00000520755 UBQLN4Q9NRR5 601 aa14□□□□□ -0.17
LSM1-203ENST00000520755 ZNF443Q9Y2A4 671 aaPredicted RBP14□□□□□ -0.17
LSM1-203ENST00000520755 PINLYPA6NC86 204 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 SUV39H1O43463 412 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 OIP5O43482 229 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 PDE9AO76083 593 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 SERPINA1P01009 418 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 THBS1P07996 1170 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 EEF1A1P68104 462 aaKnown RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 TRAP1Q12931 704 aaKnown RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 FLOT2Q14254 428 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 INPP5JQ15735 1006 aaPredicted RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 CYBRD1Q53TN4 286 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 TBCELQ5QJ74 424 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 TMEM81Q6P7N7 255 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 FAM180AQ6UWF9 173 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 CBLL1Q75N03 491 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 DHFR2Q86XF0 187 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 SPPL2CQ8IUH8 684 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 SMYD1Q8NB12 490 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 OR52E4Q8NGH9 312 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 OR10Q1Q8NGQ4 319 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 OR52P1PQ8NH57 321 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 PMM1Q92871 262 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 SNRNP40Q96DI7 357 aaKnown RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 JSRP1Q96MG2 331 aaPredicted RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 OSBPL11Q9BXB4 747 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 GALNT9Q9HCQ5 603 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 TUBA8Q9NY65 449 aaPredicted RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 ABCG2Q9UNQ0 655 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 NTNG1Q9Y2I2 539 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 CHD6Q8TD26 2715 aa13.99□□□□□ -0.17
LSM1-203ENST00000520755 SMG1Q96Q15 3661 aaKnown RBP13.99□□□□□ -0.17
LSM1-203ENST00000520755 A0A1W2PQD3 144 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 C2orf72A6NCS6 295 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 CFAP73A6NFT4 308 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 ALG1L2C9J202 215 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 SCO2O43819 266 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 DBIP07108 87 aaKnown RBP13.98□□□□□ -0.17
LSM1-203ENST00000520755 NID1P14543 1247 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 MASP1P48740 699 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 ERFP50548 548 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 PLGLB1Q02325 96 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 CCNIQ14094 377 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 DUSP7Q16829 419 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 NDUFAF6Q330K2 333 aa13.98□□□□□ -0.17
LSM1-203ENST00000520755 MRPL2Q5T653 305 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms