RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TMEM185BQ9H7F4 350 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 LYRM4Q9HD34 91 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 LYARQ9NX58 379 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 TAS2R16Q9NYV7 291 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 LEF1Q9UJU2 399 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 MCTS1Q9ULC4 181 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 CRYL1Q9Y2S2 319 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 IGHV1-18A0A0C4DH31 117 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 GLOD5A6NK44 160 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 GOLGA8KD6RF30 607 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 GOLGA8TH3BQL2 631 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 PIP5K1BO14986 540 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 RGS14O43566 566 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 XPNPEP2O43895 674 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 GPR137BO60478 399 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 NDUFS3O75489 264 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 SYNGR4O95473 234 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 PLATP00750 562 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 YES1P07947 543 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ANPEPP15144 967 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ENPP1P22413 925 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 CALCRP30988 508 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 TIA1P31483 386 aaKnown RBP eCLIP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 TTPAP49638 278 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 STXBP1P61764 594 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 MVKQ03426 396 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 EGR3Q06889 387 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 PLCXD2Q0VAA5 305 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 MGAT2Q10469 447 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 CSHL1Q14406 222 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF311Q5JNZ3 666 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 HLA-DQA1Q5Y7H0 255 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 LRRC70Q7Z2Q7 622 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 LRRC6Q86X45 466 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ZSCAN4Q8NAM6 433 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 C17orf47Q8NEP4 570 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 NEK11Q8NG66 645 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 TMBIM1Q969X1 311 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 C1GALT1C1Q96EU7 318 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 MRFAP1L1Q96HT8 127 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 MUS81Q96NY9 551 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ALS2CR12Q96Q35 445 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF300Q96RE9 604 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 HAUS8Q9BT25 410 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 MCMBPQ9BTE3 642 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 BRINP2Q9C0B6 783 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 REXO4Q9GZR2 422 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 MS4A7Q9GZW8 240 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 C16orf95Q9H693 158 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 PALMDQ9NP74 551 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 FAM53CQ9NYF3 392 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 ADAM29Q9UKF5 820 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 RIMKLBQ9ULI2 386 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 NENFQ9UMX5 172 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 FOXJ3Q9UPW0 622 aa5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 TET2Q6N021 2002 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-216ENST00000519489 PCNX3Q9H6A9 2034 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 IGHV3-15A0A0B4J1V0 119 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 LRRC53A6NM62 1247 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CLGNO14967 610 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 EFNA2O43921 213 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 TSPAN2O60636 221 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 ITGA5P08648 1049 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CCDC172P0C7W6 258 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 KRT15P19012 456 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 ACHEP22303 614 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CPN2P22792 545 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 GATA3P23771 443 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CTNNA2P26232 953 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 HOXD3P31249 432 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 GALNSP34059 522 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 THBS4P35443 961 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 RFX3P48380 749 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 SEC24CP53992 1094 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 HNRNPH2P55795 449 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 TMEM33P57088 247 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 TIAL1Q01085 375 aaKnown RBP eCLIP5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF154Q13106 437 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 IKZF1Q13422 519 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 PRPSAP1Q14558 356 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 TPD52L1Q16890 204 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 Q6YL49 198 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 TMPRSS11BQ86T26 416 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CPNE9Q8IYJ1 553 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 RNF10Q8N5U6 811 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 WFDC9Q8NEX5 89 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 POC1BQ8TC44 478 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CFHR4Q92496 578 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CCT6BQ92526 530 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 RDH5Q92781 318 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 ADOQ96SZ5 270 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 RPF2Q9H7B2 306 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CNTD2Q9H8S5 307 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 PELI2Q9HAT8 420 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 CHRAC1Q9NRG0 131 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 SEC14L4Q9UDX3 406 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 MYO6Q9UM54 1294 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 SIGLEC9Q9Y336 463 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 HYOU1Q9Y4L1 999 aa5.72□□□□□ -1.49
CTNNA1-216ENST00000519489 AUP1Q9Y679 476 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms