RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ANKRD54Q6NXT1 300 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 CD300LGQ6UXG3 332 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 PLCZ1Q86YW0 608 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZDHHC1Q8WTX9 485 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 CDCA4Q9BXL8 241 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 ABCG5Q9H222 651 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 C19orf25Q9UFG5 118 aaPredicted RBP10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 SPTA1P02549 2419 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 GVINP1Q7Z2Y8 2422 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRBV2A0A0J9YWF9 115 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 GXYLT2A0PJZ3 443 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 HYKKA2RU49 373 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRIM64BA6NI03 449 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM171A2A8MVW0 826 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 RFXAPO00287 272 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 DUX1O43812 170 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 MAOBP27338 520 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 APEX1P27695 318 aaKnown RBP10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 NKX3-2P78367 333 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 BAK1Q16611 211 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF362Q5T0B9 420 aaPredicted RBP10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 PAQR7Q86WK9 346 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 HAVCR1Q96D42 359 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 ACTRT3Q9BYD9 372 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 THSD1Q9NS62 852 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 SPATA6Q9NWH7 488 aaPredicted RBP10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 RABL2BQ9UNT1 228 aa10.18□□□□□ -0.78
PCDHGA1-202ENST00000517417 RP1P56715 2156 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRBV5-3A0A0A0MS03 114 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 A0A1W2PPL8 197 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF208O43345 1280 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 B4GALT3O60512 393 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 RDH16O75452 317 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 ARAFP10398 606 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 FBLP22087 321 aaKnown RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 GRK5P34947 590 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF81P51508 661 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 TAS2R43P59537 309 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 SHISA6Q6ZSJ9 500 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR6F1Q8NGZ6 308 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 SGTBQ96EQ0 304 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 NECTIN4Q96NY8 510 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 WDR77Q9BQA1 342 aaPredicted RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 MKRN2Q9H000 416 aaKnown RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 MUTYHQ9UIF7 546 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 FBXO9Q9UK97 447 aaPredicted RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 HS3ST2Q9Y278 367 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 CSNK1G3Q9Y6M4 447 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 MIA3Q5JRA6 1907 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 TTC3P53804 2025 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 A0A0G2JPF8 293 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 HNRNPCL3B7ZW38 293 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 PROS1P07225 676 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 GKN3PP0CG01 181 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 PRKCAP17252 672 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 ARHGDIBP52566 201 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 RPS25P62851 125 aaKnown RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 LPAL2Q16609 132 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 CCDC58Q4VC31 144 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 BCL2L15Q5TBC7 163 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 PRAMEF17Q5VTA0 474 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR2L2Q8NH16 312 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMEM234Q8WY98 164 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 METTL2AQ96IZ6 378 aaKnown RBP10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 SAMD8Q96LT4 415 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 OPALINQ96PE5 141 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 DPH1Q9BZG8 443 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 ACER3Q9NUN7 267 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 CD6P30203 668 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 GRM7Q14831 915 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 IRF4Q15306 451 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 BCL2A1Q16548 175 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 CARD17Q5XLA6 110 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 TCEAL6Q6IPX3 200 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM109AQ8N4B1 249 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 MSANTD3Q96H12 275 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 C7orf34Q96L11 122 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 HHIPQ96QV1 700 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 CWH43Q9H720 699 aa10.17□□□□□ -0.78
PCDHGA1-202ENST00000517417 FXYD6-FXYD2A0A087WZ82 144 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 H0YIV9 168 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SGK494L7N484 410 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 MAN2B1O00754 1011 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 S1PR1P21453 382 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 KCNJ5P48544 419 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 MAZP56270 477 aaKnown RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAPQ12884 760 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ELOAQ14241 798 aaKnown RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SGCAQ16586 387 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 DEFB133Q30KQ1 61 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 HSD17B12Q53GQ0 312 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CCNJQ5T5M9 372 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 LAIR1Q6GTX8 287 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TANGO2Q6ICL3 276 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CPOQ8IVL8 374 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF615Q8N8J6 731 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms