RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 RNF103-CHMP3A0A140T963 221 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 GOLGA8OA6NCC3 632 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 TUBAL3A6NHL2 446 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 C9JVG2 144 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 GOLGA8NF8WBI6 632 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 OIP5O43482 229 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 SMNDC1O75940 238 aaKnown RBP eCLIP11.77□□□□□ -0.53
DDR1-275ENST00000514434 SNUPNO95149 360 aaKnown RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 NGFRP08138 427 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 KRT16P08779 473 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 CPOXP36551 454 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 ZNF41P51814 821 aaPredicted RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 C21orf58P58505 322 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 SIRPAP78324 504 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 SGCBQ16585 318 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 SMU1Q2TAY7 513 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 NDUFAF6Q330K2 333 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 FBXL19-AS1Q494R0 122 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 OLIG3Q7RTU3 272 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 C6orf120Q7Z4R8 191 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 KIF18BQ86Y91 864 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 GOT1L1Q8NHS2 421 aaPredicted RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 MOAP1Q96BY2 351 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 ZFP3Q96NJ6 502 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 UCN2Q96RP3 112 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 RBM24Q9BX46 236 aaKnown RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 ACBD3Q9H3P7 528 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 DNAJB12Q9NXW2 375 aaKnown RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 NKIRAS1Q9NYS0 192 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 HAO1Q9UJM8 370 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 FOXD3Q9UJU5 478 aaPredicted RBP11.77□□□□□ -0.53
DDR1-275ENST00000514434 PCDHGB4Q9UN71 923 aa11.77□□□□□ -0.53
DDR1-275ENST00000514434 A0A1W2PNV4 684 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 LINC01387J3KSC0 135 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 EIF1AYO14602 144 aaKnown RBP11.76□□□□□ -0.53
DDR1-275ENST00000514434 NUDT14O95848 222 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 MATN1P21941 496 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 LCN1P31025 176 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 EIF1AXP47813 144 aaKnown RBP11.76□□□□□ -0.53
DDR1-275ENST00000514434 RPS3AP61247 264 aaKnown RBP11.76□□□□□ -0.53
DDR1-275ENST00000514434 PHC1P78364 1004 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 PON3Q15166 354 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 GLYR1Q49A26 553 aaPredicted RBP11.76□□□□□ -0.53
DDR1-275ENST00000514434 FLYWCH1Q4VC44 716 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 FBXW10Q5XX13 1052 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 BHLHB9Q6PI77 547 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 CAMKMTQ7Z624 323 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 RFWD2Q8NHY2 731 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 RNF145Q96MT1 663 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 POLDIP3Q9BY77 421 aaKnown RBP11.76□□□□□ -0.53
DDR1-275ENST00000514434 PRRG4Q9BZD6 226 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 SERHL2Q9H4I8 314 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 WDR55Q9H6Y2 383 aaPredicted RBP11.76□□□□□ -0.53
DDR1-275ENST00000514434 MEAF6Q9HAF1 191 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 TMBIM4Q9HC24 238 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 MED17Q9NVC6 651 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 THAP1Q9NVV9 213 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 GALNT8Q9NY28 637 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 JKAMPQ9P055 326 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 PACSIN3Q9UKS6 424 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 CARD8Q9Y2G2 431 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 AP4B1Q9Y6B7 739 aa11.76□□□□□ -0.53
DDR1-275ENST00000514434 A0A087WZY1 265 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 H3BNH8 94 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 GTPBP1O00178 669 aaKnown RBP11.75□□□□□ -0.53
DDR1-275ENST00000514434 RNASET2O00584 256 aaKnown RBP11.75□□□□□ -0.53
DDR1-275ENST00000514434 SDHDO14521 159 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 TNFRSF21O75509 655 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 CTAG2O75638 210 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 TNFSF13O75888 250 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 IL11P20809 199 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 EPHA3P29320 983 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 S100A3P33764 101 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 PEX19P40855 299 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 UFM1P61960 85 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 ZNF117Q03924 483 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 GPR68Q15743 365 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 TMEM44Q2T9K0 475 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 PLPPR5Q32ZL2 321 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 FAM174BQ3ZCQ3 159 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDR1-275ENST00000514434 NXNQ6DKJ4 435 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 OR2A2Q6IF42 318 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 TNFAIP8L2Q6P589 184 aaPredicted RBP11.75□□□□□ -0.53
DDR1-275ENST00000514434 VWA1Q6PCB0 445 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 CBLN3Q6UW01 205 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 MISPQ8IVT2 679 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 WDR75Q8IWA0 830 aaKnown RBP11.75□□□□□ -0.53
DDR1-275ENST00000514434 KIRREL3Q8IZU9 778 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 GTPBP8Q8N3Z3 284 aaPredicted RBP11.75□□□□□ -0.53
DDR1-275ENST00000514434 TMCO5AQ8N6Q1 288 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 ZNF527Q8NB42 609 aa11.75□□□□□ -0.53
DDR1-275ENST00000514434 ATP6V1C2Q8NEY4 427 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms