RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MTERF3Q96E29 417 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 FAM120BQ96EK7 910 aaKnown RBP9.03□□□□□ -0.96
CCL28-203ENST00000513525 C14orf79Q96F83 325 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 REXO5Q96IC2 774 aaKnown RBP9.03□□□□□ -0.96
CCL28-203ENST00000513525 EGLN2Q96KS0 407 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 C9orf16Q9BUW7 83 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 OSBPL11Q9BXB4 747 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 EBPLQ9BY08 206 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 UGT2B28Q9BY64 529 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
CCL28-203ENST00000513525 ZNF703Q9H7S9 590 aaPredicted RBP9.03□□□□□ -0.96
CCL28-203ENST00000513525 COQ10BQ9H8M1 238 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 CXorf21Q9HAI6 301 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 PROK2Q9HC23 129 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 MYNNQ9NPC7 610 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 ATAD3AQ9NVI7 634 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 QPCTLQ9NXS2 382 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 CORO2BQ9UQ03 480 aa9.03□□□□□ -0.96
CCL28-203ENST00000513525 CHCHD2Q9Y6H1 151 aaPredicted RBP9.03□□□□□ -0.96
CCL28-203ENST00000513525 MED12LQ86YW9 2145 aa9.02□□□□□ -0.96
CCL28-203ENST00000513525 KIAA1549Q9HCM3 1950 aa9.02□□□□□ -0.96
CCL28-203ENST00000513525 PCNX3Q9H6A9 2034 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 MED13LQ71F56 2210 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 C1orf226A1L170 272 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 ANKRD33BA6NCL7 494 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 A6NHS1 94 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 NPIPA2E9PIF3 369 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 NPIPA3F8WFD2 350 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 CXCR6O00574 342 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 PGRMC2O15173 223 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 HCN1O60741 890 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 GBAP04062 536 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 LYNP07948 512 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 RAP2AP10114 183 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 DDX5P17844 614 aaKnown RBP9.02□□□□□ -0.97
CCL28-203ENST00000513525 IGFBP2P18065 325 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 SSTR2P30874 369 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 PIGAP37287 484 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 GSTM5P46439 218 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 WNT3P56703 355 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 FUT7Q11130 342 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 SLC10A1Q14973 349 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 PDK3Q15120 406 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 GXYLT1Q4G148 440 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 TMEM154Q6P9G4 183 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 DNAJC14Q6Y2X3 702 aaPredicted RBP9.02□□□□□ -0.97
CCL28-203ENST00000513525 ZBTB49Q6ZSB9 765 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 COMMD6Q7Z4G1 85 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 AMIGO2Q86SJ2 522 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 SERPINA11Q86U17 422 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 GALNT12Q8IXK2 581 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 TAGAPQ8N103 731 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 LRRC25Q8N386 305 aaPredicted RBP9.02□□□□□ -0.97
CCL28-203ENST00000513525 RPRMLQ8N4K4 120 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 C17orf47Q8NEP4 570 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 OR7A2PQ8NGA2 310 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 OR4K14Q8NGD5 310 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 LILRB4Q8NHJ6 448 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCL28-203ENST00000513525 UCN3Q969E3 161 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 LURAP1Q96LR2 239 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 GAL3ST4Q96RP7 486 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 INPP5KQ9BT40 448 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 DUSP26Q9BV47 211 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 KRTAP4-8Q9BYQ9 185 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 SEMA6AQ9H2E6 1030 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 IKZF5Q9H5V7 419 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 REEP4Q9H6H4 257 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 MAGIXQ9H6Y5 334 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 PNPLA3Q9NST1 481 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 BOKQ9UMX3 212 aaPredicted RBP9.02□□□□□ -0.97
CCL28-203ENST00000513525 RNF6Q9Y252 685 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 PCDHGB3Q9Y5G1 929 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 AP4B1Q9Y6B7 739 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 CCDC168Q8NDH2 2452 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 MED12Q93074 2177 aa9.02□□□□□ -0.97
CCL28-203ENST00000513525 C2orf92A0A1B0GVN3 265 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 GNG14A0A1W2PPG7 69 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 A0A1W2PS29 197 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 RNASET2O00584 256 aaKnown RBP9.01□□□□□ -0.97
CCL28-203ENST00000513525 WDR1O75083 606 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 GUCY1B2O75343 617 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 DEAF1O75398 565 aaPredicted RBP9.01□□□□□ -0.97
CCL28-203ENST00000513525 SMNDC1O75940 238 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCL28-203ENST00000513525 KLK1P06870 262 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 CELA3AP09093 270 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 CT62P0C5K7 136 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 CPMP14384 443 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 GPX2P18283 190 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 ELAVL4P26378 380 aaKnown RBP9.01□□□□□ -0.97
CCL28-203ENST00000513525 ACVR2AP27037 513 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 SSTR4P31391 388 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 MAN2A2P49641 1150 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 TMED10P49755 219 aaKnown RBP9.01□□□□□ -0.97
CCL28-203ENST00000513525 CHN2P52757 468 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 NUP107P57740 925 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 CHRNB3Q05901 458 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 TFF3Q07654 80 aa9.01□□□□□ -0.97
CCL28-203ENST00000513525 PDE7AQ13946 482 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms