RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 EXOC3L1Q86VI1 746 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 C17orf64Q86WR6 236 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF595Q8IYB9 648 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ARIH2OSQ8N7S6 290 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ANKRD42Q8N9B4 389 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF740Q8NDX6 193 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TRPV3Q8NET8 790 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 OR4K1Q8NGD4 311 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 NT5CQ8TCD5 201 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SMAP2Q8WU79 429 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM216AQ8WUB2 273 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PTPMT1Q8WUK0 201 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 WDR60Q8WVS4 1066 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 KAT2AQ92830 837 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 HAUS1Q96CS2 278 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SPACA9Q96E40 222 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PGM2Q96G03 612 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SMIM10Q96HG1 83 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ADAD1Q96M93 576 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 QKIQ96PU8 341 aaKnown RBP eCLIP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM111AQ96PZ2 611 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 FYTTD1Q96QD9 318 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 KRT12Q99456 494 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PKP4Q99569 1192 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 APOL2Q9BQE5 337 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 DOHHQ9BU89 302 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 P2RY12Q9H244 342 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PROK2Q9HC23 129 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PNO1Q9NRX1 252 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 FAIMQ9NVQ4 179 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TRMT1Q9NXH9 659 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 GPR52Q9Y2T5 361 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 WBP11Q9Y2W2 641 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CLDN16Q9Y5I7 305 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SNX8Q9Y5X2 465 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CHCHD2Q9Y6H1 151 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 RYR3Q15413 4870 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TRRAPQ9Y4A5 3859 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 IGHV4-30-2A0A087WSY4 118 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A1W2PNV4 684 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF860A6NHJ4 632 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ERI2A8K979 691 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 IQCF5A8MTL0 148 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM157AC9JC47 383 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 APOC4-APOC2K7ER74 178 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 NDUFS8O00217 210 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 HCRTR2O43614 444 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SSX4O60224 188 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CEP104O60308 925 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF354AO60765 605 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CBR3O75828 277 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 GAS8O95995 478 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 GOT2P00505 430 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SERPINC1P01008 464 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CGAP01215 116 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 APOC2P02655 101 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CSTBP04080 98 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SERPING1P05155 500 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SERPINA6P08185 405 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ITGA5P08648 1049 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CSF3P09919 207 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 IGHV4-31P0DP07 118 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SKILP12757 684 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 PECAM1P16284 738 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 NPPBP16860 134 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ITGA2P17301 1181 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TNNI3P19429 210 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TNFRSF1BP20333 461 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 IL11P20809 199 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 USF1P22415 310 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 IGFBP5P24593 272 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 HPDP32754 393 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 DEKP35659 375 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CPOXP36551 454 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CDKN2BP42772 138 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 BDKRB1P46663 353 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 NAGLUP54802 743 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ALDH18A1P54886 795 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 DYNLT1P63172 113 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 RPP38P78345 283 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TXNL4AP83876 142 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 GALNT1Q10472 559 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ASPHQ12797 758 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CDH17Q12864 832 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TSTA3Q13630 321 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SERTAD2Q14140 314 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 POU6F1Q14863 301 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 EFTUD2Q15029 972 aaKnown RBP eCLIP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 NTRK2Q16620 822 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CYP1B1Q16678 543 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 KLHL38Q2WGJ6 581 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TIGD3Q6B0B8 471 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 LCTLQ6UWM7 567 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 UGT2A3Q6UWM9 527 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CLEC17AQ6ZS10 378 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF534Q76KX8 674 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SSX8Q7RTT4 187 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 APTXQ7Z2E3 356 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms