RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RAD51DO75771 328 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DFFBO76075 338 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SOX30O94993 753 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ITGB2P05107 769 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 LCKP06239 509 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF43P17038 809 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PVALBP20472 110 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CAPZBP47756 277 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PRLHRP49683 370 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IDH3AP50213 366 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 RPL14P50914 215 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF81P51508 661 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PITX1P78337 314 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TXNL4AP83876 142 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC18A2Q05940 514 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GALNT1Q10472 559 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IHHQ14623 411 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 B3GNT9Q6UX72 402 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 LRIG3Q6UXM1 1119 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PAQR9Q6ZVX9 377 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF550Q7Z398 422 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DEFB107AQ8IZN7 70 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 UMODL1-AS1Q8N2C9 162 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GALNT16Q8N428 558 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 METTL25Q8N6Q8 603 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR5L1Q8NGL2 311 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GPR150Q8NGU9 434 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC2A12Q8TD20 617 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DNASE2BQ8WZ79 361 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ISCUQ9H1K1 167 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 KCNF1Q9H3M0 494 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CALHM2Q9HA72 323 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PARPBPQ9NWS1 579 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 POLR3HQ9Y535 204 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DENND4CQ5VZ89 1909 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CCDC88CQ9P219 2028 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IGHV3-20A0A0C4DH32 117 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 FAM237BA0A1B0GVD1 139 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1W2PRB8 838 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 METTL21EPA6NDL7 271 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GLOD5A6NK44 160 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 WASH4PA8MWX3 477 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SSNA1O43805 119 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SUSD5O60279 629 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SRPX2O60687 465 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TPST2O60704 377 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GLCEO94923 617 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PRH1P02810 166 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CLEC3BP05452 202 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CCL4P13236 92 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 FOLR1P15328 257 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GABRA3P34903 492 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CDKN2BP42772 138 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 EFNA3P52797 238 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CEBPGP53567 150 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TLE1Q04724 770 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PCBP2Q15366 365 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HACD2Q6Y1H2 254 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM150AQ86TG1 271 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR4N5Q8IXE1 308 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 RNF175Q8N4F7 328 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR10H4Q8NGA5 316 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MYDGFQ969H8 173 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C8orf44Q96CB5 159 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IMP4Q96G21 291 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR5B2Q96R09 309 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 BOCQ9BWV1 1114 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TDRD1Q9BXT4 1180 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TEX101Q9BY14 249 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 EGLN1Q9GZT9 426 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 RHOJQ9H4E5 214 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 RPF2Q9H7B2 306 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IL17BQ9UHF5 180 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ST14Q9Y5Y6 855 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1W2PQF6 199 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 BCKDKO14874 412 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TXNL1O43396 289 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PCDH7O60245 1069 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NPHS1O60500 1241 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf105O95561 183 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HOXC4P09017 264 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HOXB6P17509 224 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IL1RNP18510 177 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PGCP20142 388 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 BGNP21810 368 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 FOXN2P32314 431 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MC3RP41968 323 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC1A3P43003 542 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IRAK1P51617 712 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IST1P53990 364 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GFERP55789 205 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DCDC1P59894 354 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NRG1Q02297 640 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MERTKQ12866 999 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TRAF3Q13114 568 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CLN3Q13286 438 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OLIG2Q13516 323 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MPP2Q14168 576 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms