RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TFPTP0C1Z6 253 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 HSD11B1P28845 292 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 STAT5AP42229 794 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 BTG2P78543 158 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ASB15Q8WXK1 588 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 HPS1Q92902 700 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 LRRC61Q9BV99 259 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ULBP3Q9BZM4 244 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ZNF385DQ9H6B1 395 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 A6NL46 340 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 KIAA0513O60268 411 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 TFAP2AP05549 437 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 HBQ1P09105 142 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 PRR35P0CG20 571 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CCNOP22674 350 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 GADD45AP24522 165 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CMPK2Q5EBM0 449 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 PSD4Q8NDX1 1056 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ZNF420Q8TAQ5 688 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-207ENST00000504761 NEIL3Q8TAT5 605 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 NT5DC2Q9H857 520 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 SEC14L4Q9UDX3 406 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ST14Q9Y5Y6 855 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 TRBV11-1A0A0K0K1C0 115 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CPNE6O95741 557 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CRHBPP24387 322 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 TMBIM6P55061 237 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ERVK-25P63136 954 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CNRIP1Q96F85 164 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-207ENST00000504761 HOXD1Q9GZZ0 328 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 TIGARQ9NQ88 270 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 AGAP14A8MT82 685 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 NDUFB2O95178 105 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 HTR1AP08908 422 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 KCNJ5P48544 419 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 SNTA1Q13424 505 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 JAGN1Q8N5M9 183 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 OR7G2Q8NG99 324 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 PIGUQ9H490 435 aa13.15□□□□□ -0.3
TCOF1-207ENST00000504761 LCTP09848 1927 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 GPR179Q6PRD1 2367 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SAGE2PA6NJ88 616 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 CLDN24A6NM45 220 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 KEAP1Q14145 624 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 PRAMEF17Q5VTA0 474 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 C1orf216Q8TAB5 229 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 FOXN4Q96NZ1 517 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 CSF3RQ99062 836 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 UBQLN4Q9NRR5 601 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 OLAHQ9NV23 265 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 HMGN4O00479 90 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 CTNSO60931 367 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SERPINA3P01011 423 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SOX3P41225 446 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 E2F2Q14209 437 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SGCAQ16586 387 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 RPL13AP3Q6NVV1 102 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 LRFN4Q6PJG9 635 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 IL20RBQ6UXL0 311 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF367Q7RTV3 350 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 PIWIL3Q7Z3Z3 882 aaKnown RBP13.14□□□□□ -0.31
TCOF1-207ENST00000504761 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
TCOF1-207ENST00000504761 B3GNT8Q7Z7M8 397 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SYT14Q8NB59 555 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 ORAI3Q9BRQ5 295 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 NPLQ9BXD5 320 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-207ENST00000504761 TMEM38AQ9H6F2 299 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 HPF1Q9NWY4 346 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF222Q9UK12 451 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SVILO95425 2214 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 C2orf72A6NCS6 295 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 A6NHS1 94 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 SLC35E2P0CK97 266 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 EMX1Q04741 257 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-207ENST00000504761 RUNX2Q13950 521 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 ARHGAP11AQ6P4F7 1023 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-207ENST00000504761 B3GNT4Q9C0J1 378 aa13.14□□□□□ -0.31
TCOF1-207ENST00000504761 G3V3Y1 287 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 MED25Q71SY5 747 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 SNX29P2Q8IUI4 249 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PAPD5Q8NDF8 572 aaKnown RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 OR13C2Q8NGS9 318 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 DNAJA4Q8WW22 397 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 THAP4Q8WY91 577 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 ELF4Q99607 663 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 GABRG3Q99928 467 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 NAA50Q9GZZ1 169 aaKnown RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 HEMK1Q9Y5R4 338 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms