RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 ZNF41P51814 821 aaPredicted RBP24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 BEND6Q5SZJ8 279 aaPredicted RBP24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 ANXA8L1Q5VT79 327 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 VPS37AQ8NEZ2 397 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 B4GALNT2Q8NHY0 566 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 TESCQ96BS2 214 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 OR7D2Q96RA2 312 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 RBM24Q9BX46 236 aaKnown RBP24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 PINK1Q9BXM7 581 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 OTOGQ6ZRI0 2925 aa24.44■■□□□ 1.5
SH3GL3-204ENST00000492099 C7orf72A4D263 438 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 TUBAL3A6NHL2 446 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 DUXAA6NLW8 204 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 H0YC42 278 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 CLNS1AP54105 237 aaKnown RBP24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 TPD52P55327 224 aaPredicted RBP24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 CLDN20P56880 219 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 DPY19L1Q2PZI1 675 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 OGFOD2Q6N063 350 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 C6orf120Q7Z4R8 191 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 CLECL1Q8IZS7 167 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 GTPBP8Q8N3Z3 284 aaPredicted RBP24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 METTL25Q8N6Q8 603 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 SMPDL3BQ92485 455 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 MED17Q9NVC6 651 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 NKIRAS1Q9NYS0 192 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 PACSIN3Q9UKS6 424 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 ZNF175Q9Y473 711 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 KCNE3Q9Y6H6 103 aa24.43■■□□□ 1.5
SH3GL3-204ENST00000492099 NUP214P35658 2090 aaPredicted RBP24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 PCNX3Q9H6A9 2034 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 PRSS51A0A1B0GVH4 220 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 A0A1W2PNV4 684 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 H3BNH8 94 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 CTAG2O75638 210 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 TNFSF13O75888 250 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 MATN1P21941 496 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 CPA2P48052 419 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 ATP12AP54707 1039 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 MAGOHP61326 146 aaKnown RBP24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 CD226Q15762 336 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 KLHL26Q53HC5 615 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 ATG16L1Q676U5 607 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 LUZP2Q86TE4 346 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 OR4A15Q8NGL6 344 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 RAB3IL1Q8TBN0 382 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 PHOSPHO1Q8TCT1 267 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 MGARPQ8TDB4 240 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 SH3YL1Q96HL8 342 aaPredicted RBP24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 ITGB1BP2Q9UKP3 347 aa24.42■■□□□ 1.5
SH3GL3-204ENST00000492099 SHISA8B8ZZ34 492 aa24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 ANKRD28O15084 1053 aa24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 AK1P00568 194 aa24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 PLPPR5Q32ZL2 321 aa24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 WDR75Q8IWA0 830 aaKnown RBP24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 FIG4Q92562 907 aa24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 TMBIM4Q9HC24 238 aa24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 DNAJB12Q9NXW2 375 aaKnown RBP24.41■■□□□ 1.5
SH3GL3-204ENST00000492099 CCDC168Q8NDH2 2452 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 RNF103-CHMP3A0A140T963 221 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 TRPC5OSA6NMA1 111 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 A8MXE2 369 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 HDAC3O15379 428 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 SCN2BO60939 215 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 SNNO75324 88 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 EPXP11678 715 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 DAZAP2Q15038 168 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 PON3Q15166 354 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 SGCBQ16585 318 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 SPATA19Q7Z5L4 167 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 GGNQ86UU5 652 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 OR5D16Q8NGK9 328 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 TLCD1Q96CP7 247 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 SLC35G5Q96KT7 338 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 RNF122Q9H9V4 155 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 RASSF1Q9NS23 344 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 PAQR5Q9NXK6 330 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 MED12LQ86YW9 2145 aa24.4■■□□□ 1.5
SH3GL3-204ENST00000492099 FAM221AA4D161 298 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 A6NNC1 897 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 SLCO1B7G3V0H7 640 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 SDHDO14521 159 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 MSTNO14793 375 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 FCGR2AP12318 317 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 UQCRC2P22695 453 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 EIF1P41567 113 aaKnown RBP24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 RPS26P62854 115 aaKnown RBP24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 RAC1P63000 192 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 CNEP1R1Q8N9A8 125 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 CHDHQ8NE62 594 aaPredicted RBP24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 FNDC9Q8TBE3 224 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 ZNF845Q96IR2 970 aaPredicted RBP24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 RNF145Q96MT1 663 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 SDF2Q99470 211 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 POLDIP3Q9BY77 421 aaKnown RBP24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 GALNT8Q9NY28 637 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 DTNAQ9Y4J8 743 aa24.39■■□□□ 1.49
SH3GL3-204ENST00000492099 ANKRD17O75179 2603 aaKnown RBP24.38■■□□□ 1.49
SH3GL3-204ENST00000492099 NPIPA5A0A0B4J1W7 369 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms