RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 MAP3K8P41279 467 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 RAC1P63000 192 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 POU6F2P78424 691 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 PDE7AQ13946 482 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 Q5PR19 223 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 GTF2IRD2BQ6EKJ0 949 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 ESPNLQ6ZVH7 1005 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 GTF2IRD2Q86UP8 949 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 CXorf67Q86X51 503 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 LRRC75A-AS1Q8N1F1 130 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 OR2V1Q8NHB1 315 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 TWIST2Q8WVJ9 160 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 HOXB13Q92826 284 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 GIMAP5Q96F15 307 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 OTUB1Q96FW1 271 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 C16orf58Q96GQ5 468 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 REXO5Q96IC2 774 aaKnown RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 PPP3R2Q96LZ3 170 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 RNF145Q96MT1 663 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 TUBB1Q9H4B7 451 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 TMEM185BQ9H7F4 350 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 GLRX2Q9NS18 164 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 ZCCHC3Q9NUD5 404 aaKnown RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 MED17Q9NVC6 651 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 TRAF6Q9Y4K3 522 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 DNAJC15Q9Y5T4 150 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 ABCA2Q9BZC7 2435 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 FAM171A2A8MVW0 826 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 SIAH2O43255 324 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 NUDT14O95848 222 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 BCKDHAP12694 445 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 PPP3CBP16298 524 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 CCKARP32238 428 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 FRKP42685 505 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-216ENST00000490796 SLC6A8P48029 635 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 LTBQ06643 244 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 SPDYE7PQ495Y7 208 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 HBMQ6B0K9 141 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 CLEC9AQ6UXN8 241 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 C20orf204Q6ZNR8 217 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 ZNF527Q8NB42 609 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 B4GALNT2Q8NHY0 566 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 FAM110BQ8TC76 370 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 APOPT1Q96IL0 206 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 BTBD2Q9BX70 525 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 PLSCR4Q9NRQ2 329 aa17.68■□□□□ 0.42
SREBF1-216ENST00000490796 C7orf72A4D263 438 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 H3BNH8 94 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 TNFSF11O14788 317 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 PIP5K1BO14986 540 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 NPHS1O60500 1241 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 SS18L1O75177 396 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 HMGN2P05204 90 aaKnown RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 CHRNGP07510 517 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 FGF4P08620 206 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 KRT16P08779 473 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 PABPC4LP0CB38 370 aaKnown RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 EIF1P41567 113 aaKnown RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 LASP1Q14847 261 aaKnown RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 GUSBP1Q15486 140 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 PLPPR5Q32ZL2 321 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 ATP6AP1LQ52LC2 224 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 ARL13AQ5H913 290 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 BEX5Q5H9J7 111 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 CCNJQ5T5M9 372 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 Q71RC1 249 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 LRRN4CLQ8ND94 238 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 PHOSPHO1Q8TCT1 267 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 AGR3Q8TD06 166 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 ADAMTS15Q8TE58 950 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 FAM120BQ96EK7 910 aaKnown RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 PRPF18Q99633 342 aaKnown RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 SMR3AQ99954 134 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 TIGARQ9NQ88 270 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 ATAD3AQ9NVI7 634 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 FAF1Q9UNN5 650 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-216ENST00000490796 VPS13CQ709C8 3753 aa17.67■□□□□ 0.42
SREBF1-216ENST00000490796 A0A1W2PQD3 144 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 TMEM233B4DJY2 109 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 SCAMP2O15127 329 aaKnown RBP17.66■□□□□ 0.42
SREBF1-216ENST00000490796 PEX11AO75192 247 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 ALDH3A1P30838 453 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 CARD18P57730 90 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 IFFO1Q0D2I5 559 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 MLC1Q15049 377 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 BEND4Q6ZU67 534 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 ZAR1Q86SH2 424 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 LILRA2Q8N149 483 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 RIBC1Q8N443 379 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-216ENST00000490796 OSTF1Q92882 214 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 CDS1Q92903 461 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 PERPQ96FX8 193 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 KLHL15Q96M94 604 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 STACQ99469 402 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 HOXD1Q9GZZ0 328 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 PIGUQ9H490 435 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 DUSP22Q9NRW4 184 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 FBXO34Q9NWN3 711 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 GIN1Q9NXP7 522 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms