RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 E2F6O75461 281 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 HPRP00739 348 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 SMIM11AP58511 58 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 SPIBQ01892 262 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 H3F3CQ6NXT2 135 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 LYPD8Q6UX82 237 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 IZUMO2Q6UXV1 221 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 DEF8Q6ZN54 512 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF440Q8IYI8 595 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 PRR22Q8IZ63 422 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 OFCC1Q8IZS5 231 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 CBR4Q8N4T8 237 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 TTC9Q92623 222 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 SDCCAG3Q96C92 435 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF184Q99676 751 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 SLC29A1Q99808 456 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 PSD2Q9BQI7 771 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 TACO1Q9BSH4 297 aaKnown RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 EXOSC3Q9NQT5 275 aaKnown RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 DNAJB12Q9NXW2 375 aaKnown RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 USE1Q9NZ43 259 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 TESQ9UGI8 421 aaKnown RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 IL17BQ9UHF5 180 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 TESMINQ9Y4I5 508 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 LRRC42Q9Y546 428 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 MRPS18BQ9Y676 258 aaKnown RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 ARRDC5A6NEK1 342 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 ALG1L2C9J202 215 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 PDLIM1O00151 329 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 TNFRSF11BO00300 401 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 AP3D1O14617 1153 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 FADS1O60427 444 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 ICOSLGO75144 302 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 OR5F1O95221 314 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 SERPINA7P05543 415 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 CELA2AP08217 269 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 THRBP10828 461 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 YAP1P46937 504 aaKnown RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 ARHGDIAP52565 204 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 IST1P53990 364 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 CDH12P55289 794 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 PPP2R2BQ00005 443 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 DAG1Q14118 895 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 NTRK2Q16620 822 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 COLEC12Q5KU26 742 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 JMJD6Q6NYC1 403 aaPredicted RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF550Q7Z398 422 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 RANBP3LQ86VV4 465 aaPredicted RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF614Q8N883 585 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 POGLUT1Q8NBL1 392 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 THAP3Q8WTV1 239 aaPredicted RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 CNOT9Q92600 299 aaKnown RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 HGDQ93099 445 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF597Q96LX8 424 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 RASL10BQ96S79 203 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 MCHR1Q99705 422 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 FUZQ9BT04 418 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 ANKRD19PQ9H560 264 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 NMNAT1Q9HAN9 279 aaPredicted RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 FLRT3Q9NZU0 649 aa13□□□□□ -0.33
VPS26A-205ENST00000489656 YARS2Q9Y2Z4 477 aaKnown RBP13□□□□□ -0.33
VPS26A-205ENST00000489656 A0A1W2PRQ8 180 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 H3BNH8 94 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 EI24O14681 340 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 FRS3O43559 492 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 OR2J2O76002 312 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 GADD45GO95257 159 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 CSTAP01040 98 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ALPLP05186 524 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 H1F0P07305 194 aaKnown RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ITGAMP11215 1152 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 LIFP15018 202 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 HPGDP15428 266 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 IFNA8P32881 189 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 EVI2BP34910 448 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ACAA2P42765 397 aaKnown RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 HSPA13P48723 471 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ALDH3A2P51648 485 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 AQP4P55087 323 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 MLF1P58340 268 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 Q0VFX4 171 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ATP1A4Q13733 1029 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 DGCR6Q14129 220 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 TBC1D25Q3MII6 688 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ENTPD8Q5MY95 495 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 TBPL2Q6SJ96 375 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 APOOLQ6UXV4 268 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 C16orf47Q6ZP98 133 aaPredicted RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 STK32CQ86UX6 486 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 TSPYL5Q86VY4 417 aaPredicted RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 RPS19BP1Q86WX3 136 aaKnown RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 TOR1AIP2Q8NFQ8 470 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 TMCO6Q96DC7 493 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 RDH12Q96NR8 316 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms