RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PIWIL3Q7Z3Z3 882 aaKnown RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 RANBP3LQ86VV4 465 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 BEST3Q8N1M1 668 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF614Q8N883 585 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 SMYD1Q8NB12 490 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 POGLUT1Q8NBL1 392 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 PAPD5Q8NDF8 572 aaKnown RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 OR10G3Q8NGC4 313 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 RNF138Q8WVD3 245 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 HSH2DQ96JZ2 352 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 SMAD5Q99717 465 aaKnown RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 LAT2Q9GZY6 243 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF552Q9H707 407 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 LIN28AQ9H9Z2 209 aaKnown RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 SACM1LQ9NTJ5 587 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 ARMC1Q9NVT9 282 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 FBXO34Q9NWN3 711 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 KLRF1Q9NZS2 232 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 LRFN1Q9P244 771 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 GMPR2Q9P2T1 348 aaKnown RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 AURKCQ9UQB9 309 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 SH3GLB1Q9Y371 365 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 RRP15Q9Y3B9 282 aaKnown RBP10.13□□□□□ -0.79
HDLBP-242ENST00000488013 AP4S1Q9Y587 144 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 PCDHGB6Q9Y5F9 930 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 NCOR2Q9Y618 2525 aa10.13□□□□□ -0.79
HDLBP-242ENST00000488013 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 IGLV3-32A0A0A0MS00 114 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 A6NL46 340 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 C1QTNF9BB2RNN3 333 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 FAAHO00519 579 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 AP3D1O14617 1153 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 FABP3P05413 133 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 C1QTNF9P0C862 333 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 THRBP10828 461 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CD247P20963 164 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CASP3P42574 277 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CRYBA2P53672 197 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 RGS8P57771 180 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 COPZ1P61923 177 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ELF3P78545 371 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 RIPK1Q13546 671 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TUBA3CQ13748 450 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CCNIQ14094 377 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 MRPL2Q5T653 305 aaKnown RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 FCRLBQ6BAA4 426 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TUBA3EQ6PEY2 450 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 IGFL3Q6UXB1 125 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ZAR1Q86SH2 424 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ADGRG5Q8IZF4 528 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ZADH2Q8N4Q0 377 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TMEM178AQ8NBL3 297 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 FDCSPQ8NFU4 85 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 PHOSPHO1Q8TCT1 267 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CANT1Q8WVQ1 401 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ZG16BQ96DA0 208 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 SLC47A1Q96FL8 570 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 C5orf34Q96MH7 638 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 FRMD6Q96NE9 622 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CHID1Q9BWS9 393 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 OSBPL11Q9BXB4 747 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 ANGPTL4Q9BY76 406 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TRIM2Q9C040 744 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 QRSL1Q9H0R6 528 aaKnown RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 RASSF4Q9H2L5 321 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 PTGES2Q9H7Z7 377 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 SH2D2AQ9NP31 389 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TESQ9UGI8 421 aaKnown RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TUBD1Q9UJT1 453 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 KLF13Q9Y2Y9 288 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-242ENST00000488013 APC2O95996 2303 aa10.12□□□□□ -0.79
HDLBP-242ENST00000488013 TRAV17A0A0B4J275 112 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 FAM47E-STBD1D6RA91 191 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 KLRC4-KLRK1H3BQV0 150 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ADAMDEC1O15204 470 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 HCRTR2O43614 444 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF354AO60765 605 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ENTPD5O75356 428 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 DEAF1O75398 565 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-242ENST00000488013 SLC25A12O75746 678 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 KRT36O76013 467 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ANGPTL1O95841 491 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 WDPCPO95876 746 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 OPN1SWP03999 348 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 RHCEP18577 417 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 CNR1P21554 472 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 FASP25445 335 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 CD96P40200 585 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 MAGEA2P43356 314 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 OR1C1Q15619 314 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 MAPK14Q16539 360 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 NRF1Q16656 503 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF836Q6ZNA1 936 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 LINC00696Q6ZRV3 163 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 GALNT10Q86SR1 603 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 CARM1Q86X55 608 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 VRK2Q86Y07 508 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 PSD4Q8NDX1 1056 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms