RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 LINC01560Q8TB33 94 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 FIG4Q92562 907 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 ZNF845Q96IR2 970 aaPredicted RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 SLC35G5Q96KT7 338 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 NPAS1Q99742 590 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 SH3GL2Q99962 352 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 PRRG4Q9BZD6 226 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 TMEM185BQ9H7F4 350 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 MEAF6Q9HAF1 191 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 CRIM1Q9NZV1 1036 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 S100A3P33764 101 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 EIF1AXP47813 144 aaKnown RBP15.92■□□□□ 0.14
COL6A1-204ENST00000486023 CLDN15P56746 228 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 RPS3AP61247 264 aaKnown RBP15.92■□□□□ 0.14
COL6A1-204ENST00000486023 UFM1P61960 85 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 CASP8Q14790 479 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 GPR68Q15743 365 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 NDUFAF6Q330K2 333 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 SPANXN4Q5MJ08 99 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 EXOSC6Q5RKV6 272 aaKnown RBP15.92■□□□□ 0.14
COL6A1-204ENST00000486023 ANXA8L1Q5VT79 327 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 FBXW10Q5XX13 1052 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 ADGRE4PQ86SQ3 457 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 KLHDC3Q9BQ90 382 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 RBM24Q9BX46 236 aaKnown RBP15.92■□□□□ 0.14
COL6A1-204ENST00000486023 SLC24A3Q9HC58 644 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 MED17Q9NVC6 651 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 HAO1Q9UJM8 370 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 CARD8Q9Y2G2 431 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 AP4B1Q9Y6B7 739 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 KIAA1549Q9HCM3 1950 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 PDZD2O15018 2839 aa15.92■□□□□ 0.14
COL6A1-204ENST00000486023 CSMD2Q7Z408 3487 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 IGLV3-32A0A0A0MS00 114 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 PRSS51A0A1B0GVH4 220 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 TUBAL3A6NHL2 446 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 H3BNH8 94 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 LINC01387J3KSC0 135 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 RNASET2O00584 256 aaKnown RBP15.91■□□□□ 0.14
COL6A1-204ENST00000486023 SDHDO14521 159 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 HDAC3O15379 428 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 CYP7B1O75881 506 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 IL18BPO95998 194 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 NGFRP08138 427 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 ALDOCP09972 364 aaKnown RBP15.91■□□□□ 0.14
COL6A1-204ENST00000486023 CHI3L1P36222 383 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-204ENST00000486023 CPOXP36551 454 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 C21orf58P58505 322 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 PHC1P78364 1004 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 PON3Q15166 354 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 FAM174BQ3ZCQ3 159 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 GLYR1Q49A26 553 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-204ENST00000486023 CAMKMTQ7Z624 323 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 CDH24Q86UP0 819 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 MISPQ8IVT2 679 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 TMCO5AQ8N6Q1 288 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 ZNF527Q8NB42 609 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 ATP6V1C2Q8NEY4 427 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 OR8J2Q8NGG1 315 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 FNDC9Q8TBE3 224 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 XAGE5Q8WWM1 108 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 NRGNQ92686 78 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 TLCD1Q96CP7 247 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 MARK4Q96L34 752 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 TEX37Q96LM6 180 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 RNF145Q96MT1 663 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 SFXN3Q9BWM7 321 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 HOXD1Q9GZZ0 328 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 OR51I1Q9H343 314 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 STOML1Q9UBI4 398 aa15.91■□□□□ 0.14
COL6A1-204ENST00000486023 HCFC1P51610 2035 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 A0A087WZY1 265 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 UQCRHLA0A096LP55 91 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 TRPC5OSA6NMA1 111 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 OIP5O43482 229 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 OR12D1P0DN82 309 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 CAPN3P20807 821 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 LCN1P31025 176 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 CCR4P51679 360 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 CLNS1AP54105 237 aaKnown RBP15.9■□□□□ 0.14
COL6A1-204ENST00000486023 ATP12AP54707 1039 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 ZNF117Q03924 483 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 TNFAIP8L2Q6P589 184 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-204ENST00000486023 CBLN3Q6UW01 205 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 C16orf62Q7Z3J2 963 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 KIF18BQ86Y91 864 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 RAB8BQ92930 207 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 ARL8AQ96BM9 186 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 ZFP3Q96NJ6 502 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 UCN2Q96RP3 112 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 ZBTB18Q99592 522 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 GPATCH1Q9BRR8 931 aaKnown RBP15.9■□□□□ 0.14
COL6A1-204ENST00000486023 ACBD3Q9H3P7 528 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 SERHL2Q9H4I8 314 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 DNAJB12Q9NXW2 375 aaKnown RBP15.9■□□□□ 0.14
COL6A1-204ENST00000486023 FOXD3Q9UJU5 478 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-204ENST00000486023 MKLN1Q9UL63 735 aa15.9■□□□□ 0.14
COL6A1-204ENST00000486023 A0A1W2PNV4 684 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 A0A1W2PQD3 144 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 DUXAA6NLW8 204 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms