RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 EIPR1Q53HC9 387 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 FAM91A1Q658Y4 838 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 NANOGP8Q6NSW7 305 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 MTFR2Q6P444 385 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 ENPP6Q6UWR7 440 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 C16orf89Q6UX73 402 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 CHMP1BQ7LBR1 199 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 PATL1Q86TB9 770 aaKnown RBP7.55□□□□□ -1.2
SF3A1-208ENST00000485618 MARCH3Q86UD3 253 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 ZNF614Q8N883 585 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 HIPK4Q8NE63 616 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 OR14L1PQ8NHC6 308 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 B4GALNT2Q8NHY0 566 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SLC26A7Q8TE54 656 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SSC4DQ8WTU2 575 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SLC38A5Q8WUX1 472 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 TMEM234Q8WY98 164 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SARAFQ96BY9 339 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 RCN3Q96D15 328 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 OTUB1Q96FW1 271 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-208ENST00000485618 NSL1Q96IY1 281 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 GPR137Q96N19 417 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 GNRHR2Q96P88 292 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 TAAR6Q96RI8 345 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 TREX2Q9BQ50 279 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SAP130Q9H0E3 1048 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 MYLK2Q9H1R3 596 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 NANOGQ9H9S0 305 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 BCL2L10Q9HD36 194 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 TAS2R10Q9NYW0 307 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SLC25A37Q9NYZ2 338 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 MKLN1Q9UL63 735 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 C15orf41Q9Y2V0 281 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 SVILO95425 2214 aa7.55□□□□□ -1.2
SF3A1-208ENST00000485618 DOPEY1Q5JWR5 2465 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 A0A1B0GUH1 482 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 A1L4Q6 167 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 GJE1A6NN92 205 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 FBP2O00757 339 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 BCKDKO14874 412 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 GSTA4O15217 222 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 HCRTR2O43614 444 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 FCMRO60667 390 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 TNFRSF21O75509 655 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PGM3O95394 542 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ACTL6AO96019 429 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 CSTAP01040 98 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 IGKV1D-16P01601 117 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 HPNP05981 417 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 BCHEP06276 602 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 THBS1P07996 1170 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 UBL4AP11441 157 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ABOP16442 354 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PGCP20142 388 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ME2P23368 584 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 DPP4P27487 766 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SRD5A2P31213 254 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PTGS2P35354 604 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 RASSF2P50749 326 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 COPZ1P61923 177 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 KCNJ10P78508 379 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 CHRNEQ04844 493 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 CBFBQ13951 182 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SCARB2Q14108 478 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 VEZF1Q14119 521 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SYPL1Q16563 259 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 LIN52Q52LA3 116 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 COX20Q5RI15 118 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PDZK1Q5T2W1 519 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ZNF324BQ6AW86 544 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 TYW3Q6IPR3 259 aaKnown RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ZNF550Q7Z398 422 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 RETREG3Q86VR2 466 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 IFNEQ86WN2 208 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PM20D2Q8IYS1 436 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 TMEM251Q8N6I4 163 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 TMCO5AQ8N6Q1 288 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ANKFN1Q8N957 763 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 OR52P1PQ8NH57 321 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 RNF138Q8WVD3 245 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 WDR60Q8WVS4 1066 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 POP5Q969H6 163 aaKnown RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SLC35B4Q969S0 331 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ZBTB8AQ96BR9 441 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 AURKBQ96GD4 344 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SLX1AQ9BQ83 275 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PIGQQ9BRB3 760 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 CPPED1Q9BRF8 314 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 LAT2Q9GZY6 243 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 DEFB127Q9H1M4 99 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 DSN1Q9H410 356 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ZNF703Q9H7S9 590 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 KAT8Q9H7Z6 458 aaKnown RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ZDHHC11Q9H8X9 412 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 PROK2Q9HC23 129 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms