RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 APOPT1Q96IL0 206 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 PPP3R2Q96LZ3 170 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 GATA5Q9BWX5 397 aaPredicted RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 ZCCHC3Q9NUD5 404 aaKnown RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 CCL27Q9Y4X3 112 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 SNX8Q9Y5X2 465 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 FBN1P35555 2871 aaKnown RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 SHISA8B8ZZ34 492 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ALG1L2C9J202 215 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 LSM1O15116 133 aaKnown RBP11.9□□□□□ -0.5
UBA3-210ENST00000485424 NPHS1O60500 1241 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 TBX19O60806 448 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 KCNK2O95069 426 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 NUDT14O95848 222 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 IGKV1D-16P01601 117 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ACP2P11117 423 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 TBXA2RP21731 343 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 CRYGSP22914 178 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 LCN1P31025 176 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 PCYT1AP49585 367 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 POU6F2P78424 691 aaPredicted RBP11.9□□□□□ -0.5
UBA3-210ENST00000485424 SLC18A2Q05940 514 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 SPDYE7PQ495Y7 208 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ZNF385BQ569K4 471 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 KANK2Q63ZY3 851 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 GTF2IRD2BQ6EKJ0 949 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ZNF474Q6S9Z5 364 aaPredicted RBP11.9□□□□□ -0.5
UBA3-210ENST00000485424 RNF165Q6ZSG1 346 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 Q6ZSR9 355 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 FAM214BQ7L5A3 538 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ZNF550Q7Z398 422 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 GTF2IRD2Q86UP8 949 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 STK32CQ86UX6 486 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ZNF527Q8NB42 609 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 OR2T11Q8NH01 316 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 SH3YL1Q96HL8 342 aaPredicted RBP11.9□□□□□ -0.5
UBA3-210ENST00000485424 COX4I2Q96KJ9 171 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 PRPF18Q99633 342 aaKnown RBP11.9□□□□□ -0.5
UBA3-210ENST00000485424 CCL19Q99731 98 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ZNF395Q9H8N7 513 aaPredicted RBP11.9□□□□□ -0.5
UBA3-210ENST00000485424 UBQLN4Q9NRR5 601 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ATAD3AQ9NVI7 634 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 ABCA1O95477 2261 aa11.9□□□□□ -0.5
UBA3-210ENST00000485424 CADP27708 2225 aa11.9□□□□□ -0.51
UBA3-210ENST00000485424 IGLV3-32A0A0A0MS00 114 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 A0A1W2PRB8 838 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 H3BNH8 94 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 NGFRP08138 427 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 KRT16P08779 473 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 EFNA1P20827 205 aaPredicted RBP11.89□□□□□ -0.51
UBA3-210ENST00000485424 ALDH3A1P30838 453 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 CCKARP32238 428 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 DUSP5Q16690 384 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBA3-210ENST00000485424 ATP6AP1LQ52LC2 224 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 CCNJQ5T5M9 372 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 MFSD12Q6NUT3 480 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 APOOLQ6UXV4 268 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 ESPNLQ6ZVH7 1005 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
UBA3-210ENST00000485424 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
UBA3-210ENST00000485424 NATD1Q8N6N6 113 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 SLC16A11Q8NCK7 471 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 OR6K3Q8NGY3 331 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 OR4C3Q8NH37 302 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 OR10D3Q8NH80 312 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 B4GALNT2Q8NHY0 566 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 PHOSPHO1Q8TCT1 267 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 OTUB1Q96FW1 271 aaPredicted RBP11.89□□□□□ -0.51
UBA3-210ENST00000485424 GMPPAQ96IJ6 420 aaPredicted RBP11.89□□□□□ -0.51
UBA3-210ENST00000485424 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 FAF1Q9UNN5 650 aaPredicted RBP11.89□□□□□ -0.51
UBA3-210ENST00000485424 TRAF6Q9Y4K3 522 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 DNAJC15Q9Y5T4 150 aa11.89□□□□□ -0.51
UBA3-210ENST00000485424 CUBNO60494 3623 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PLCE1Q9P212 2302 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 FAM171A2A8MVW0 826 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 DEFB108AA8MXU0 73 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 TNFSF11O14788 317 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PIP5K1BO14986 540 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 SCAMP2O15127 329 aaKnown RBP11.88□□□□□ -0.51
UBA3-210ENST00000485424 CFLARO15519 480 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 CXCL13O43927 109 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PEX11AO75192 247 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 AQP8O94778 261 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 LY6G6DO95868 133 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 OPN1LWP04000 364 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 BCKDHAP12694 445 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PPP3CBP16298 524 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 FRKP42685 505 aaPredicted RBP11.88□□□□□ -0.51
UBA3-210ENST00000485424 RAC1P63000 192 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 TP53BP2Q13625 1128 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PDE7AQ13946 482 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 LASP1Q14847 261 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms