RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 XPNPEP2O43895 674 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 HEXBP07686 556 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 NPIPA8P0DM63 369 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 ATXN8OSP0DMR3 200 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 POU2F1P14859 743 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 TSPAN7P41732 249 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 CRISP1P54107 249 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 CSNK2BP67870 215 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 SLC35A2P78381 396 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 ALDH6A1Q02252 535 aaKnown RBP24.23■■□□□ 1.47
SHOX2-204ENST00000483851 PRSS58Q8IYP2 241 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 ACOT11Q8WXI4 607 aaPredicted RBP24.23■■□□□ 1.47
SHOX2-204ENST00000483851 DTNBP1Q96EV8 351 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 SLC41A3Q96GZ6 507 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 ZNF559Q9BR84 538 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 NUDT9Q9BW91 350 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 TTC28Q96AY4 2481 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 A0A087WUU8 490 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 TRAPPC13A5PLN9 417 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 IDSB3KWA1 339 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 MEN1O00255 615 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 IL33O95760 270 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 RFX3P48380 749 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 TARDBPQ13148 414 aaKnown RBP eCLIP24.22■■□□□ 1.471e-7■■■□□ 15.9
SHOX2-204ENST00000483851 C11orf91Q3C1V1 193 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 ATOH1Q92858 354 aaPredicted RBP24.22■■□□□ 1.47
SHOX2-204ENST00000483851 REV1Q9UBZ9 1251 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 NXT1Q9UKK6 140 aaKnown RBP24.22■■□□□ 1.47
SHOX2-204ENST00000483851 RALGAPA1Q6GYQ0 2036 aa24.22■■□□□ 1.47
SHOX2-204ENST00000483851 C2orf92A0A1B0GVN3 265 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 A0A1W2PPW3 197 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 CDX4O14627 284 aaPredicted RBP24.21■■□□□ 1.47
SHOX2-204ENST00000483851 TO15178 435 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 CD59P13987 128 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ACVR2AP27037 513 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 EBPQ15125 230 aaKnown RBP24.21■■□□□ 1.47
SHOX2-204ENST00000483851 RRM2BQ7LG56 351 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 GDF7Q7Z4P5 450 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ZER1Q7Z7L7 766 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ZNF321PQ8N8H1 164 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 METTL21AQ8WXB1 218 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 OCEL1Q9H607 264 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 WDR54Q9H977 334 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 GPN2Q9H9Y4 310 aaPredicted RBP24.21■■□□□ 1.47
SHOX2-204ENST00000483851 PPIEQ9UNP9 301 aaKnown RBP24.21■■□□□ 1.47
SHOX2-204ENST00000483851 SNX5Q9Y5X3 404 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ZAR1LA6NP61 321 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ALOX12BO75342 701 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ADH7P40394 386 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 HLA-DQA1Q5Y7H0 255 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ZNF613Q6PF04 617 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 SLC29A4Q7RTT9 530 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 ZNF550Q7Z398 422 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 RAB2BQ8WUD1 216 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 DCUN1D5Q9BTE7 237 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 PRR14Q9BWN1 585 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 NXF5Q9H1B4 397 aaKnown RBP24.21■■□□□ 1.47
SHOX2-204ENST00000483851 CTPS2Q9NRF8 586 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 TPRKBQ9Y3C4 175 aa24.21■■□□□ 1.47
SHOX2-204ENST00000483851 PTGES3LE9PB15 166 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 MMP11P24347 488 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 CHMP24386 653 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 FMO3P31513 532 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 GP2P55259 537 aaKnown RBP24.2■■□□□ 1.46
SHOX2-204ENST00000483851 E2F1Q01094 437 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 PTGES3Q15185 160 aaKnown RBP24.2■■□□□ 1.46
SHOX2-204ENST00000483851 MRPL14Q6P1L8 145 aaKnown RBP24.2■■□□□ 1.46
SHOX2-204ENST00000483851 ANKRD37Q7Z713 158 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 ZNF527Q8NB42 609 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 GNPDA2Q8TDQ7 276 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 FAR1Q8WVX9 515 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 CMKLR1Q99788 373 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 KRCC1Q9NPI7 259 aaPredicted RBP24.2■■□□□ 1.46
SHOX2-204ENST00000483851 UBQLN4Q9NRR5 601 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 AASSQ9UDR5 926 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 SLC35A3Q9Y2D2 325 aa24.2■■□□□ 1.46
SHOX2-204ENST00000483851 MPZL2O60487 215 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 MRPS14O60783 128 aaKnown RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 WBP4O75554 376 aaKnown RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 KLK3P07288 261 aaPredicted RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 GPR143P51810 404 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 EMP2P54851 167 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 HOXC5Q00444 222 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 EMX1Q04741 257 aaPredicted RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 NFATC3Q12968 1075 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 OR1Q1Q15612 314 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 ZNF730Q6ZMV8 503 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 RNF113BQ8IZP6 322 aaKnown RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 HSPBAP1Q96EW2 488 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 SIGLEC11Q96RL6 698 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 SEMA4CQ9C0C4 833 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 DNAJB12Q9NXW2 375 aaKnown RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 ERVK-18Q9QC07 812 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 COL27A1Q8IZC6 1860 aaPredicted RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 CDC42P60953 191 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 PLAURQ03405 335 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 FOXD4Q12950 439 aaPredicted RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 DCTN2Q13561 401 aaKnown RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 NNATQ16517 81 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 LANCL3Q6ZV70 420 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms