RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 NPIPA7E9PJI5 369 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 KLF4O43474 513 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 FRS3O43559 492 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 LYPD3O95274 346 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 KLK3P07288 261 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NPIPA8P0DM63 369 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 CD59P13987 128 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 POU2F1P14859 743 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 GABRB1P18505 474 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 HTR2AP28223 471 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 RBM34P42696 430 aaKnown RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 OMPP47874 163 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 GPR143P51810 404 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 EMP2P54851 167 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 RAB15P59190 212 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 SNRPGP62308 76 aaKnown RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 C12orf73Q69YU5 71 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 TMEM205Q6UW68 189 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 ISLR2Q6UXK2 745 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 B3GNT8Q7Z7M8 397 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 LAPTM4BQ86VI4 370 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 P3H2Q8IVL5 708 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NAXDQ8IW45 347 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 C9orf40Q8IXQ3 194 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 SLC34A3Q8N130 599 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 FAM71CQ8NEG0 241 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NFAM1Q8NET5 270 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 B3GNT7Q8NFL0 401 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 FAM81AQ8TBF8 368 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 CDC6Q99741 560 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 CMKLR1Q99788 373 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 PRSS27Q9BQR3 290 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 PRRG3Q9BZD7 231 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 WWTR1Q9GZV5 400 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 IMPAD1Q9NX62 359 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 RNF6Q9Y252 685 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 TMEM5Q9Y2B1 443 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 COL27A1Q8IZC6 1860 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NCOR1O75376 2440 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 COL6A3P12111 3177 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 A0A0B4J2E0 115 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 A0A1B0GX12 115 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 A0A1W2PQD3 144 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CDX4O14627 284 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CHP2O43745 196 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 TSPAN2O60636 221 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 WBP4O75554 376 aaKnown RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CSTAP01040 98 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 THY1P04216 161 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 TP53P04637 393 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 NAGAP17050 411 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 TBXA2RP21731 343 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 EEF1B2P24534 225 aaKnown RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 KRT20P35900 424 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 ACAA2P42765 397 aaKnown RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 PNLIPRP2P54317 469 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CDH15P55291 814 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CTBP2P56545 445 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SLC35A2P78381 396 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 PLAURQ03405 335 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 MVKQ03426 396 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 TUBA3CQ13748 450 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 ZBED5Q49AG3 693 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 TMEM201Q5SNT2 666 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SLC25A30Q5SVS4 291 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 FNDC7Q5VTL7 733 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 PRR23CQ6ZRP0 262 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 MRGPREQ86SM8 312 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SATL1Q86VE3 508 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 NKAIN4Q8IVV8 208 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SLC43A2Q8N370 569 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SVOPQ8N4V2 548 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF321PQ8N8H1 164 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 BPIFB6Q8NFQ5 453 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 NUBPLQ8TB37 319 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 APH1BQ8WW43 257 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CNOT9Q92600 299 aaKnown RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 DGCR14Q96DF8 476 aaKnown RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 VMP1Q96GC9 406 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 Q96MT0 163 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 NODALQ96S42 347 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SPSB2Q99619 263 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 LPAR4Q99677 370 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 CTRCQ99895 268 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 STRADBQ9C0K7 418 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 POLR1BQ9H9Y6 1135 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 APMAPQ9HDC9 416 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF226Q9NYT6 803 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 GPN3Q9UHW5 284 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SLC7A7Q9UM01 511 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 PCDHGA1Q9Y5H4 931 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 SNX5Q9Y5X3 404 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 R4GN57 208 aa10.15□□□□□ -0.78
VTI1A-204ENST00000480057 LOC102723996A0A087X1L8 192 aa10.14□□□□□ -0.79
VTI1A-204ENST00000480057 PRR33A8MZF0 331 aa10.14□□□□□ -0.79
VTI1A-204ENST00000480057 C9J4A7 227 aa10.14□□□□□ -0.79
VTI1A-204ENST00000480057 H3BN98 237 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms