RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TESMINQ9Y4I5 508 aa5.56□□□□□ -1.52
CPS1-207ENST00000479988 TMEM184BQ9Y519 407 aaPredicted RBP5.56□□□□□ -1.52
CPS1-207ENST00000479988 PTPRDP23468 1912 aa5.56□□□□□ -1.52
CPS1-207ENST00000479988 ARPC4-TTLL3A0A0A6YYG9 625 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 A0A1B0GTL3 188 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 FTCDNL1E5RQL4 147 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 G3V3Y1 287 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SULT2B1O00204 365 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 HEXAP06865 529 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SMIM18P0DKX4 95 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 JUNBP17275 347 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 MYL12AP19105 171 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 TACR1P25103 407 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 DPP4P27487 766 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 B4GALNT1Q00973 533 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 MC2RQ01718 297 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 RIN1Q13671 783 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 KIAA0040Q15053 153 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 UGT8Q16880 541 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ZNF766Q5HY98 468 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CAMKMTQ7Z624 323 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 RIMKLAQ8IXN7 391 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 LAS2Q8IYD9 372 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 COPS4Q9BT78 406 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SGPP1Q9BX95 441 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CDH20Q9HBT6 801 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 EXOSC4Q9NPD3 245 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 ACSS1Q9NUB1 689 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 CRNNQ9UBG3 495 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 NEUROG3Q9Y4Z2 214 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 IGHV3-20A0A0C4DH32 117 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 IGHV5-51A0A0C4DH38 117 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CLDN25C9JDP6 229 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PEPDP12955 493 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 FOLR1P15328 257 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 MMP11P24347 488 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 BPIFB3P59826 476 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SIRPAP78324 504 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CDC20Q12834 499 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 KLRB1Q12918 225 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 NPRL3Q12980 569 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ATP1A4Q13733 1029 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SELPLGQ14242 412 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 RAB39AQ14964 217 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PTGES3Q15185 160 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 RGS21Q2M5E4 152 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PROX2Q3B8N5 592 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CRB2Q5IJ48 1285 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ARTNQ5T4W7 220 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 LINC00299Q6ZSB3 139 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 OVCH1Q7RTY7 1134 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PIWIL3Q7Z3Z3 882 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 VRK3Q8IV63 474 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 OR7G1Q8NGA0 311 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 OR52R1Q8NGF1 315 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 BBS10Q8TAM1 723 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 WDR20Q8TBZ3 569 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ADAMTS16Q8TE57 1224 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 WDR77Q9BQA1 342 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 SLITRK2Q9H156 845 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 DEFB127Q9H1M4 99 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 WDR37Q9Y2I8 494 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 MED31Q9Y3C7 131 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CEPT1Q9Y6K0 416 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PLXNA3P51805 1871 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 EIF1AYO14602 144 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 MAGEB3O15480 346 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 JRKO75564 520 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 IGLV3-19P01714 112 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ZNF43P17038 809 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 KLHL12Q53G59 568 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 RHBDD2Q6NTF9 364 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PWWP2BQ6NUJ5 590 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 VASH1Q7L8A9 365 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 CALHM3Q86XJ0 350 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 DND1Q8IYX4 353 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 SLC25A45Q8N413 288 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 MORN4Q8NDC4 146 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ANAPC16Q96DE5 110 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 EGLN2Q96KS0 407 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 OR5B2Q96R09 309 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PIP5K1AQ99755 562 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 PIGQQ9BRB3 760 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 TSPAN10Q9H1Z9 355 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 ZNF768Q9H5H4 540 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 PLEKHA1Q9HB21 404 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 LYRM4Q9HD34 91 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SIRT5Q9NXA8 310 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 TEX10Q9NXF1 929 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 ZNF639Q9UID6 485 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 IKZF2Q9UKS7 526 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 CCL27Q9Y4X3 112 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ENPP4Q9Y6X5 453 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 NBASA2RRP1 2371 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SAGE2PA6NJ88 616 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 SLC1A7O00341 560 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 MYL12BO14950 172 aa5.55□□□□□ -1.52
CPS1-207ENST00000479988 ZNF821O75541 412 aaPredicted RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 DBIP07108 87 aaKnown RBP5.55□□□□□ -1.52
CPS1-207ENST00000479988 H1F0P07305 194 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms