RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ACSS1Q9NUB1 689 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.53
MRPL55-228ENST00000476267 MCTS1Q9ULC4 181 aaKnown RBP11.71□□□□□ -0.53
MRPL55-228ENST00000476267 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 TNFSF11O14788 317 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 HS3ST1O14792 307 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 EFNA2O43921 213 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 OPN1LWP04000 364 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 SHC1P29353 583 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 LCN1P31025 176 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 CRHR1P34998 444 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 NR1H2P55055 460 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 ZCCHC12Q6PEW1 402 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 FIGNL1Q6PIW4 674 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 SEZ6L2Q6UXD5 910 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 BEND4Q6ZU67 534 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 TRABD2AQ86V40 505 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 GABRG1Q8N1C3 465 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 GATSQ8NAP1 163 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 OR6Y1Q8NGX8 325 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 LILRB1Q8NHL6 650 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-228ENST00000476267 CEP70Q8NHQ1 597 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 FBXO30Q8TB52 745 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 ZBED6CLQ96FA7 236 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-228ENST00000476267 PLPPR2Q96GM1 343 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 C16orf58Q96GQ5 468 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 ACTR6Q9GZN1 396 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 HHATLQ9HCP6 504 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 UBQLN4Q9NRR5 601 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 GPR52Q9Y2T5 361 aa11.7□□□□□ -0.54
MRPL55-228ENST00000476267 SLC28A1O00337 649 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 LSM1O15116 133 aaKnown RBP11.69□□□□□ -0.54
MRPL55-228ENST00000476267 PLGP00747 810 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-228ENST00000476267 SHBGP04278 402 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 THBS1P07996 1170 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 ELK4P28324 431 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 PCSK6P29122 969 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 GPC1P35052 558 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 PRIM2P49643 509 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 PRKAG1P54619 331 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 CTBP2P56545 445 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 ZNF117Q03924 483 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 MLC1Q15049 377 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 ZNF239Q16600 458 aaKnown RBP11.69□□□□□ -0.54
MRPL55-228ENST00000476267 LIPMQ5VYY2 423 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 KANK2Q63ZY3 851 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 ADAM5Q6NVV9 412 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 ZFP28Q8NHY6 868 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 TMEM171Q8WVE6 324 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 PPCDCQ96CD2 204 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 FAM120BQ96EK7 910 aaKnown RBP11.69□□□□□ -0.54
MRPL55-228ENST00000476267 OTUB1Q96FW1 271 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-228ENST00000476267 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 PRRG4Q9BZD6 226 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 TMEM185BQ9H7F4 350 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 BAIAP2L1Q9UHR4 511 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 DNAJC15Q9Y5T4 150 aa11.69□□□□□ -0.54
MRPL55-228ENST00000476267 FBN3Q75N90 2809 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 OVOL3O00110 214 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 AZIN1O14977 448 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 OIP5O43482 229 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 RGS14O43566 566 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 AKAP10O43572 662 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 CRCPO75575 148 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 SYNGR4O95473 234 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 NTN1O95631 604 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 TUBBP07437 444 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 DANCRP0C864 163 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 CPA3P15088 417 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 ZNF41P51814 821 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-228ENST00000476267 MANFP55145 182 aaKnown RBP11.68□□□□□ -0.54
MRPL55-228ENST00000476267 RPL38P63173 70 aaKnown RBP11.68□□□□□ -0.54
MRPL55-228ENST00000476267 FOXF1Q12946 379 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 PCLAFQ15004 111 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 UGT3A2Q3SY77 523 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 CCNJQ5T5M9 372 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 HBMQ6B0K9 141 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 PPP4R4Q6NUP7 873 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 CBLN3Q6UW01 205 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 TFAP2EQ6VUC0 442 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 TDRPQ86YL5 185 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 GSPT2Q8IYD1 628 aaKnown RBP11.68□□□□□ -0.54
MRPL55-228ENST00000476267 LILRA2Q8N149 483 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 CLHC1Q8NHS4 586 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 B4GALNT2Q8NHY0 566 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 PSMA8Q8TAA3 256 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 RAB3IL1Q8TBN0 382 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 ZNF524Q96C55 264 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 MTERF3Q96E29 417 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 SH3YL1Q96HL8 342 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-228ENST00000476267 KLHL15Q96M94 604 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 STACQ99469 402 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 COQ10BQ9H8M1 238 aa11.68□□□□□ -0.54
MRPL55-228ENST00000476267 DUSP22Q9NRW4 184 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms