RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 GPR85P60893 370 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 MAP4K2Q12851 820 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 SYPL1Q16563 259 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 CYBRD1Q53TN4 286 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 INTS11Q5TA45 600 aaKnown RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 REEP3Q6NUK4 255 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 CDC73Q6P1J9 531 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 MDGA2Q7Z553 956 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 EID3Q8N140 333 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 NRG4Q8WWG1 115 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 LRTOMTQ8WZ04 291 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 SLC9A6Q92581 669 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 TAMM41Q96BW9 452 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 RBM18Q96H35 190 aaKnown RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 CNPPD1Q9BV87 410 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 ARMC1Q9NVT9 282 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 THUMPD1Q9NXG2 353 aaKnown RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 STOML1Q9UBI4 398 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF639Q9UID6 485 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 SAMD4AQ9UPU9 718 aaKnown RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
LINC00173-201ENST00000470091 KLF13Q9Y2Y9 288 aaPredicted RBP12.49□□□□□ -0.41
LINC00173-201ENST00000470091 TMEM247A6NEH6 219 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 C17orf105B2RV13 164 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 E9PLN8 166 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 KLRC4-KLRK1H3BQV0 150 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CHRM4P08173 479 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 TNNI3P19429 210 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 TXNL4AP83876 142 aaKnown RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 DUSP5Q16690 384 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 EXOSC6Q5RKV6 272 aaKnown RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 HMBOX1Q6NT76 420 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 MEX3BQ6ZN04 569 aaKnown RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 LRRC74BQ6ZQY2 392 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CBLL1Q75N03 491 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CCDC80Q76M96 950 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 EIF3MQ7L2H7 374 aaKnown RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 VTCN1Q7Z7D3 282 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CYP4Z2PQ8N1L4 340 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 SLC16A11Q8NCK7 471 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 PAPD5Q8NDF8 572 aaKnown RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 B3GNT7Q8NFL0 401 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 ADAMTS15Q8TE58 950 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 CDS1Q92903 461 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 SLC35A4Q96G79 324 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 HSH2DQ96JZ2 352 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 RNF145Q96MT1 663 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 UGT2B28Q9BY64 529 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 TRIM45Q9H8W5 580 aaPredicted RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 FOLH1BQ9HBA9 442 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 C6orf203Q9P0P8 240 aaPredicted RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 PRDM4Q9UKN5 801 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
LINC00173-201ENST00000470091 NCOA6Q14686 2063 aaPredicted RBP12.48□□□□□ -0.41
LINC00173-201ENST00000470091 MTORP42345 2549 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 ITGA10O75578 1167 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 CLPSP04118 112 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 ALOX5P09917 674 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 RAP2AP10114 183 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 SSTR2P30874 369 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 GALNSP34059 522 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 PTDSS1P48651 473 aaKnown RBP12.47□□□□□ -0.41
LINC00173-201ENST00000470091 NR0B1P51843 470 aaKnown RBP12.47□□□□□ -0.41
LINC00173-201ENST00000470091 BIKQ13323 160 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 TRIP10Q15642 601 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 GPAT3Q53EU6 434 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 ATAD3BQ5T9A4 648 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 C16orf62Q7Z3J2 963 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 PATL1Q86TB9 770 aaKnown RBP12.47□□□□□ -0.41
LINC00173-201ENST00000470091 CD163Q86VB7 1156 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 CDRT4Q8N9R6 151 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 POGLUT1Q8NBL1 392 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 APCDD1LQ8NCL9 501 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 BBS10Q8TAM1 723 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
LINC00173-201ENST00000470091 PYURFQ96I23 114 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 TPD52L3Q96J77 140 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 DMRTA2Q96SC8 542 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 CHID1Q9BWS9 393 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 MAGIXQ9H6Y5 334 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 ADPRHL2Q9NX46 363 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 GIN1Q9NXP7 522 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
LINC00173-201ENST00000470091 A8MVJ9 347 aa12.46□□□□□ -0.41
LINC00173-201ENST00000470091 TMEM229AB2RXF0 380 aa12.46□□□□□ -0.41
LINC00173-201ENST00000470091 G3V3Y1 287 aa12.46□□□□□ -0.41
LINC00173-201ENST00000470091 M0QX08 132 aa12.46□□□□□ -0.41
LINC00173-201ENST00000470091 CDK2AP1O14519 115 aa12.46□□□□□ -0.41
LINC00173-201ENST00000470091 PRKNO60260 465 aaPredicted RBP12.46□□□□□ -0.41
LINC00173-201ENST00000470091 ZFAND5O76080 213 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms