RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PRSS58Q8IYP2 241 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 MARVELD2Q8N4S9 558 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF441Q8N8Z8 693 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 FBXL20Q96IG2 436 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 DEPDC7Q96QD5 511 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PINK1Q9BXM7 581 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PNO1Q9NRX1 252 aaKnown RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 FAM86C1Q9NVL1 165 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 RHCGQ9UBD6 479 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 SEC14L3Q9UDX4 400 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 BAG5Q9UL15 447 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PCDHGA8Q9Y5G5 932 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 A8MUA0 341 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 MEN1O00255 615 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PCDH17O14917 1159 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 NTN1O95631 604 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 CSTF2P33240 577 aaKnown RBP eCLIP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 TRHRP34981 398 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PIGAP37287 484 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ANXA11P50995 505 aaKnown RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF136P52737 540 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 KCNC4Q03721 635 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SEC23BQ15437 767 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ELAVL1Q15717 326 aaKnown RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 NSDHLQ15738 373 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 FAM198BQ6UWH4 519 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PLEKHM3Q6ZWE6 761 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 C16orf62Q7Z3J2 963 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ANKRD37Q7Z713 158 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 C10orf53Q8N6V4 93 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 OR7G1Q8NGA0 311 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PSD2Q9BQI7 771 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 MTHFD2LQ9H903 347 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 FLRT3Q9NZU0 649 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PPIEQ9UNP9 301 aaKnown RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF443Q9Y2A4 671 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 TESMINQ9Y4I5 508 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 CELSR3Q9NYQ7 3312 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 DCHS1Q96JQ0 3298 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 B4E171 279 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PRAMEF2O60811 474 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 MITFO75030 526 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SERPINB7O75635 380 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 KLF7O75840 302 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 HPRP00739 348 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 RHCEP18577 417 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 FPR1P21462 350 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 VBP1P61758 197 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 LSM11P83369 360 aaKnown RBP eCLIP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 GANABQ14697 944 aaKnown RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ODF1Q14990 250 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 FCRLBQ6BAA4 426 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZDHHC13Q8IUH4 622 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 APCDD1LQ8NCL9 501 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 OR52P1PQ8NH57 321 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 GPR151Q8TDV0 419 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 LRFN5Q96NI6 719 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 GAL3ST1Q99999 423 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 PELOQ9BRX2 385 aaKnown RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 CNPPD1Q9BV87 410 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ANKRD60Q9BZ19 345 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SEMA4CQ9C0C4 833 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF700Q9H0M5 742 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 GHITMQ9H3K2 345 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 EXD2Q9NVH0 621 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 NTNG1Q9Y2I2 539 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 B3GALT1Q9Y5Z6 326 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 NINQ8N4C6 2090 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 IGHV3-20A0A0C4DH32 117 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 TMEM200CA6NKL6 621 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 IDSB3KWA1 339 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SYT5O00445 386 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ADAM10O14672 748 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 POLR1CO15160 346 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 FRS3O43559 492 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 STX11O75558 287 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SMNDC1O75940 238 aaKnown RBP eCLIP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 CLIC3O95833 236 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 IFNA16P05015 189 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 UMODP07911 640 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 POLR2IP36954 125 aaKnown RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 MERTKQ12866 999 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF155Q12901 538 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ILKQ13418 452 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ISXQ2M1V0 245 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF311Q5JNZ3 666 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 BORAQ6PGQ7 559 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 TMEM205Q6UW68 189 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 GLRX5Q86SX6 157 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF554Q86TJ5 538 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 BCORP1Q8N888 145 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 TMIGD2Q96BF3 282 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF347Q96SE7 839 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 OSBPL11Q9BXB4 747 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SMPD3Q9NY59 655 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-208ENST00000468300 WDR45Q9Y484 360 aa7.63□□□□□ -1.19
BRCA1-208ENST00000468300 SEC16AO15027 2179 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 CACNA1HO95180 2353 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 TRBV4-1A0A0J9YWV2 114 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 LRP3O75074 770 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms