RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 HTRA2O43464 458 aaPredicted RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 CBX7O95931 251 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 TAS2R31P59538 309 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ERVFC1P60507 584 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 KIR2DS3Q14952 304 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 STEAP3Q658P3 488 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 XKR5Q6UX68 686 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 OR4D6Q8NGJ1 314 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 OR5AR1Q8NGP9 310 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 MICU1Q9BPX6 476 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 DNMT3BQ9UBC3 853 aaKnown RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 TNFSF12O43508 249 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ENSAO43768 121 aaKnown RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 MPIG6BO95866 241 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 WDPCPO95876 746 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ETFAP13804 333 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ITGB7P26010 798 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 CD79BP40259 229 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 CAV2P51636 162 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 PDE7AQ13946 482 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ARHGAP19Q14CB8 494 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 CDKN3Q16667 212 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 AARDQ4LEZ3 155 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 LCTLQ6UWM7 567 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ZNF765Q7L2R6 523 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 MS4A15Q8N5U1 240 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 OR4N2Q8NGD1 307 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 UCN3Q969E3 161 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 VRK1Q99986 396 aaPredicted RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 PINK1Q9BXM7 581 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 DPH1Q9BZG8 443 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 HEBP1Q9NRV9 189 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 C19orf12Q9NSK7 152 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 RHBDD3Q9Y3P4 386 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 MYH14Q7Z406 1995 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 A0A0U1RQS6 177 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CLN5O75503 358 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 DBHP09172 617 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 FGF3P11487 239 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 PTH2RP49190 550 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RPL23AP62750 156 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 ZNF92Q03936 586 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MLF2Q15773 248 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 KRBOX4Q5JUW0 171 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CDHR3Q6ZTQ4 885 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 ZFP41Q8N8Y5 198 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SCRN2Q96FV2 425 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SAMD8Q96LT4 415 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 LMF2Q9BU23 707 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 OSBPL7Q9BZF2 842 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 ZBP1Q9H171 429 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 LINC00597Q9H2U6 94 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SOX17Q9H6I2 414 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 HSFX1Q9UBD0 423 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 A0A0A6YYC8 382 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 TRAPPC2LH3BP13 241 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 I3L1I5 382 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 TIMM8AO60220 97 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 KDELR2P33947 212 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SGSHP51688 502 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 PGGT1BP53609 377 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CLDN8P56748 225 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CLDN2P57739 230 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 OR4D1Q15615 310 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 NKPD1Q17RQ9 610 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 METTL2BQ6P1Q9 378 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 PDZD3Q86UT5 571 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RNF175Q8N4F7 328 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 SYT14Q8NB59 555 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 STK35Q8TDR2 534 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CLSTN3Q9BQT9 956 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 CCDC32Q9BV29 185 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 ARL6Q9H0F7 186 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 B3GNT3Q9Y2A9 372 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 HCFC2Q9Y5Z7 792 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 FAM171A2A8MVW0 826 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 KIAA0513O60268 411 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 RFPL1O75677 317 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 TSPAN15O95858 294 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MAOBP27338 520 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MGAT3Q09327 533 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 GPR50Q13585 617 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 TLDC1Q6P9B6 456 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 MEX3BQ6ZN04 569 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 MCATQ8IVS2 390 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 IGDCC3Q8IVU1 814 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 VWA5B2Q8N398 1253 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 OR52R1Q8NGF1 315 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
HPS4-209ENST00000466781 BORCS6Q96GS4 357 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 TXN2Q99757 166 aa8.2□□□□□ -1.1
HPS4-209ENST00000466781 GPN2Q9H9Y4 310 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms