RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 MAP3K8P41279 467 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 FXYD6P3P58550 94 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 PLK5Q496M5 336 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 CRTC2Q53ET0 693 aaPredicted RBP18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 ZNF614Q8N883 585 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 SYT14Q8NB59 555 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 AVL9Q8NBF6 648 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 TMEM239Q8WW34 195 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 CTHRC1Q96CG8 243 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 ARHGAP9Q9BRR9 750 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 OR52D1Q9H346 318 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 SACM1LQ9NTJ5 587 aa18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 ZNF223Q9UK11 482 aaPredicted RBP18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 SF3B6Q9Y3B4 125 aaKnown RBP18.91■□□□□ 0.62
TUBGCP3-204ENST00000464139 KCNK2O95069 426 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 LYPD3O95274 346 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 CCR5P51681 352 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 RAB38P57729 211 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 RUNX1T1Q06455 604 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 TPBGQ13641 420 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 CARTPTQ16568 116 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 SLC35F1Q5T1Q4 408 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 SMARCD3Q6STE5 483 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 ASB15Q8WXK1 588 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 UFD1Q92890 307 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 NACC2Q96BF6 587 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 CPNE5Q9HCH3 593 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 SIDT1Q9NXL6 827 aaKnown RBP18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 A0A0A6YYC8 382 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 I3L1I5 382 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 STK25O00506 426 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 OR10H2O60403 315 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 BRINP1O60477 761 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 ATP6V1E1P36543 226 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 ZNF791Q3KP31 576 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 ZNF485Q8NCK3 441 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 FANK1Q8TC84 345 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 GDF15Q99988 308 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 SEMA6CQ9H3T2 930 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 MED20Q9H944 212 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 KRCC1Q9NPI7 259 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 HCN3Q9P1Z3 774 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 POMT2Q9UKY4 750 aa18.9■□□□□ 0.62
TUBGCP3-204ENST00000464139 SLC9B1P1A6NJY1 282 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 CDC123O75794 336 aaPredicted RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 SDC2P34741 201 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 MAZP56270 477 aaKnown RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 HNRNPA0Q13151 305 aaKnown RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 LRIT3Q3SXY7 679 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 ZMAT1Q5H9K5 638 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 ZCCHC12Q6PEW1 402 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 VWA5B2Q8N398 1253 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 OR4N2Q8NGD1 307 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 GRHL3Q8TE85 626 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 HPS1Q92902 700 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 SLC25A46Q96AG3 418 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 MED17Q9NVC6 651 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 H2AFY2Q9P0M6 372 aaPredicted RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 ZC3H12DA2A288 527 aaKnown RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 OR2W5A6NFC9 320 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 HRKO00198 91 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 FABP5Q01469 135 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 NXNL2Q5VZ03 156 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 PLBD1Q6P4A8 553 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 OR8H2Q8N162 312 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 CNOT9Q92600 299 aaKnown RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 SECISBP2Q96T21 854 aaKnown RBP18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 CD180Q99467 661 aa18.89■□□□□ 0.61
TUBGCP3-204ENST00000464139 SLC30A4O14863 429 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 HMGN1P05114 100 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 SLC35E2P0CK97 266 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 ATXN8OSP0DMR3 200 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 HTR1FP30939 366 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 PDZK1Q5T2W1 519 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 GDPD3Q7L5L3 318 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 CXXC5Q7LFL8 322 aaKnown RBP18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 MCATQ8IVS2 390 aaKnown RBP18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 DEFB119Q8N690 84 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 CLDN22Q8N7P3 220 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 PSD4Q8NDX1 1056 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 KLHDC7BQ96G42 594 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 KCTD7Q96MP8 289 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 ZNF649Q9BS31 505 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 LRRC61Q9BV99 259 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 MUTYHQ9UIF7 546 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 AQP9O43315 295 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 SSX4O60224 188 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 SNX4O95219 450 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 IL1AP01583 271 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 PSPHP78330 225 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 DSG2Q14126 1118 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 ERV3-1Q14264 604 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 DESI1Q6ICB0 168 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 TMPRSS11AQ6ZMR5 421 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 SIRT6Q8N6T7 355 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 C19orf47Q8N9M1 422 aaKnown RBP18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 OR51G2Q8NGK0 314 aa18.88■□□□□ 0.61
TUBGCP3-204ENST00000464139 BRIX1Q8TDN6 353 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms