RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ZNF177Q13360 481 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 C15orf32Q32M92 178 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 GGTA1PQ4G0N0 100 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TEX44Q53QW1 395 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 BEX5Q5H9J7 111 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 SLC35D3Q5M8T2 416 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 LIPNQ5VXI9 398 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 OR2A2Q6IF42 318 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 OR4A47Q6IF82 309 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 UQCC3Q6UW78 93 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 FRRS1Q6ZNA5 592 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 DPY19L4Q7Z388 723 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 PARGQ86W56 976 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 MARCH9Q86YJ5 346 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 LRRC49Q8IUZ0 686 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ZC3H3Q8IXZ2 948 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 EFCAB13Q8IY85 973 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 METTL4Q8N3J2 472 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 GTPBP8Q8N3Z3 284 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 AQP11Q8NBQ7 271 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 FAM83FQ8NEG4 500 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF596Q8TC21 504 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 GPX8Q8TED1 209 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TMEM37Q8WXS4 190 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 HIST1H2ACQ93077 130 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TSACCQ96A04 125 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TM4SF19Q96DZ7 209 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 SH3YL1Q96HL8 342 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ZBED3Q96IU2 234 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TGM7Q96PF1 710 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 CCT8L2Q96SF2 557 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 AGPAT1Q99943 283 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 OMDQ99983 421 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 CENPKQ9BS16 269 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NDUFAF3Q9BU61 184 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ST6GALNAC5Q9BVH7 336 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NUSAP1Q9BXS6 441 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NLNQ9BYT8 704 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 FRMD8P1Q9BZ68 369 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 KAT8Q9H7Z6 458 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TLE6Q9H808 572 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 MRPL47Q9HD33 250 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 CHST11Q9NPF2 352 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 B3GAT2Q9NPZ5 323 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 MRPL22Q9NWU5 206 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 MIOXQ9UGB7 285 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ADAM28Q9UKQ2 775 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 RNF24Q9Y225 148 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 OR1A2Q9Y585 309 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ETV7Q9Y603 341 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 BZW2Q9Y6E2 419 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 PRRC2AP48634 2157 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 A0A1W2PPV4 95 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 MTMR11A4FU01 709 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SRRM4A7MD48 611 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 TRDMT1O14717 391 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 NDUFA7O95182 113 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 TSPAN12O95859 305 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CST1P01037 141 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CALCAP01258 141 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 FTH1P02794 183 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 TPM3P06753 285 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CRYGBP07316 175 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 LYNP07948 512 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 PRPS2P11908 318 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CD59P13987 128 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ANPEPP15144 967 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 FOSL2P15408 326 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CCT3P49368 545 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 RAB9AP51151 201 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CDH6P55285 790 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 RGS8P57771 180 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 PPIAP62937 165 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ASPHQ12797 758 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF74Q16587 644 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 RTL6Q6ICC9 239 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SLC25A25Q6KCM7 469 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 VTCN1Q7Z7D3 282 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SLC47A2Q86VL8 602 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 VRK2Q86Y07 508 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SLC7A5P1Q8MH63 180 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ABHD12Q8N2K0 398 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ALLCQ8N6M5 410 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 KLHDC1Q8N7A1 406 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 FAM86B1Q8N7N1 296 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 NOA1Q8NC60 698 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 WDR36Q8NI36 951 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 M1APQ8TC57 530 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CCDC12Q8WUD4 166 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 PDCD6IPQ8WUM4 868 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 APOBEC4Q8WW27 367 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ELMO1Q92556 727 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SGK3Q96BR1 496 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 UBAC1Q9BSL1 405 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms