RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 L3MBTL1Q9Y468 752 aa3.82□□□□□ -1.8
CCDC144A-211ENST00000463809 RREB1Q92766 1687 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 TNS3Q68CZ2 1445 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 ERBINQ96RT1 1412 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 GRIN2DO15399 1336 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 A0A0U1RQG5 324 aaPredicted RBP3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 DDX39AO00148 427 aaKnown RBP3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 KINO60870 393 aaKnown RBP3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 PNPP00491 289 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 IGFBP1P08833 259 aaPredicted RBP3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 HMOX1P09601 288 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 IL9RQ01113 521 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 RPA4Q13156 261 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 DPYSQ14117 519 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 BTG3Q14201 252 aaPredicted RBP3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 METTL11BQ5VVY1 283 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 LIPKQ5VXJ0 399 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 TOM1L2Q6ZVM7 507 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 MGARPQ8TDB4 240 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 ATP6V0A1Q93050 837 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 NDUFAF3Q9BU61 184 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 ACAT2Q9BWD1 397 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 DUSP12Q9UNI6 340 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 PLCH1Q4KWH8 1693 aa3.81□□□□□ -1.8
CCDC144A-211ENST00000463809 RRBP1Q9P2E9 1410 aaKnown RBP3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 TMEM89A2RUT3 159 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 HTATSF1O43719 755 aaKnown RBP3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 KERAO60938 352 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 SEMG1P04279 462 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 GNSP15586 552 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 ATP6V1E1P36543 226 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 MAGEA4P43358 317 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 CAV2P51636 162 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 CASP9P55211 416 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 SSTP61278 116 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 ACTN3Q08043 901 aaPredicted RBP3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 PPP1R8Q12972 351 aaKnown RBP3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 NME3Q13232 169 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 ZSWIM7Q19AV6 140 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 SLC10A5Q5PT55 438 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 LEG1Q6P5S2 330 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 FRA10AC1Q70Z53 315 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 CCDC36Q8IYA8 594 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 NWD2Q9ULI1 1742 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 LAMC1P11047 1609 aa3.8□□□□□ -1.8
CCDC144A-211ENST00000463809 OVOS2A0A0G2JMS6 1433 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 OVOS2A0A0J9YW53 1432 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 OVOS2Q6IE36 1432 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 ADCY9O60503 1353 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 IMPA2O14732 288 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 TM9SF1O15321 606 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 LYPLA1O75608 230 aaPredicted RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 CCNE1P24864 410 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 HNRNPFP52597 415 aaKnown RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 ZNF45Q02386 682 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 AP1B1Q10567 949 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 KCNJ11Q14654 390 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 PARP6Q2NL67 630 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 LRIT3Q3SXY7 679 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 BEND6Q5SZJ8 279 aaPredicted RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 GOLGA7Q7Z5G4 137 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 HSD17B13Q7Z5P4 300 aaPredicted RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 PEX5LQ8IYB4 626 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 LRRC17Q8N6Y2 441 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 ARNTL2Q8WYA1 636 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 SNX21Q969T3 373 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 ZNF560Q96MR9 790 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 NICN1Q9BSH3 213 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 CNPY3Q9BT09 278 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 PTGES2Q9H7Z7 377 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 PRMT8Q9NR22 394 aaPredicted RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 PNO1Q9NRX1 252 aaKnown RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 DUS2Q9NX74 493 aaKnown RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 EXOSC1Q9Y3B2 195 aaKnown RBP3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 ARHGEF5Q12774 1597 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 CASZ1Q86V15 1759 aa3.79□□□□□ -1.8
CCDC144A-211ENST00000463809 HFM1A2PYH4 1435 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 NALCNQ8IZF0 1738 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 XRN1Q8IZH2 1706 aaKnown RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 LRRIQ1Q96JM4 1722 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 ANKRD30BQ9BXX2 1392 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 CEP350Q5VT06 3117 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 A0A0U1RRA0 63 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 FBLL1A6NHQ2 334 aaKnown RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 E9PLD3 99 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 MMP23AO75900 390 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 HPNP05981 417 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 PSG2P11465 335 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 CDH5P33151 784 aaPredicted RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 RBMXP38159 391 aaKnown RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 SLC6A8P48029 635 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 OTUD4Q01804 1114 aaKnown RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 OC90Q02509 493 aaPredicted RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 ZP4Q12836 540 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 CBX3Q13185 183 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 ELAVL3Q14576 367 aaKnown RBP3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 OR5M10Q6IEU7 315 aa3.78□□□□□ -1.8
CCDC144A-211ENST00000463809 EEF2KMTQ96G04 330 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms