RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 GK3PQ14409 553 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 PPP1R3AQ16821 1122 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 SNAI3Q3KNW1 292 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 SLC25A52Q3SY17 297 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 MS4A13Q5J8X5 152 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 CTSL3PQ5NE16 218 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 ARMC12Q5T9G4 340 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 PAQR6Q6TCH4 344 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 CCDC80Q76M96 950 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 KIR3DL3Q8N743 410 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 ZSCAN4Q8NAM6 433 aaPredicted RBP3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR2T6Q8NHC8 308 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 CRYGNQ8WXF5 182 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 TAF15Q92804 592 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 C10orf35Q96D05 121 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 C12orf42Q96LP6 360 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 NSMCE3Q96MG7 304 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 PRICKLE1Q96MT3 831 aaPredicted RBP3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 EPYCQ99645 322 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 SYT15Q9BQS2 421 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 MOB1AQ9H8S9 216 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 NUDT4Q9NZJ9 180 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 WRAP73Q9P2S5 460 aaPredicted RBP3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 SEC14L3Q9UDX4 400 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 CIDEBQ9UHD4 219 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 SCML2Q9UQR0 700 aa3.4□□□□□ -1.87
HMGN3P1-201ENST00000453847 TRBV7-9A0A0J9YWB2 115 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 BCLAF3A2AJT9 711 aaKnown RBP3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 H3BMQ9 156 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 ABCD4O14678 606 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 TPST2O60704 377 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 HPP00738 406 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 IGHG4P01861 327 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 GAPDHP04406 335 aaKnown RBP3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 UMPSP11172 480 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 ANOS1P23352 680 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 IGFBP5P24593 272 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 CALML3P27482 149 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 SLC1A4P43007 532 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 DUSP3P51452 185 aaPredicted RBP3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 TPMTP51580 245 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 ATP1B3P54709 279 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 CDH4P55283 916 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 TMEM50BP56557 158 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 SRPXP78539 464 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 TGM3Q08188 693 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 RAB40BQ12829 278 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 ZNF154Q13106 437 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 VGLL4Q14135 290 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 RCN1Q15293 331 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 C6orf226Q5I0X4 101 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 GCNT7Q6ZNI0 430 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 MOB3BQ86TA1 216 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 METTL4Q8N3J2 472 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 NECAB1Q8N987 351 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR2L3Q8NG85 312 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR9A4Q8NGU2 314 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 ARNTL2Q8WYA1 636 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 GTF3AQ92664 365 aaKnown RBP3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 PLIN2Q99541 437 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 NUP58Q9BVL2 599 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 SPATA16Q9BXB7 569 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 DUSP16Q9BY84 665 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 GAB2Q9UQC2 676 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 NTNG1Q9Y2I2 539 aa3.39□□□□□ -1.87
HMGN3P1-201ENST00000453847 KANK1Q14678 1352 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR6C65A6NJZ3 312 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 CASQ2O14958 399 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 RS1O15537 224 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 KCNAB3O43448 404 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 TRIM3O75382 744 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 SCGNO76038 276 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 NUDT14O95848 222 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 NDUFB10O96000 172 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 CST1P01037 141 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 ATP5A1P25705 553 aaKnown RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 OR1D4P47884 311 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 EFNB2P52799 333 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 HSPA2P54652 639 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 RPS8P62241 208 aaKnown RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 RIPPLY1Q0D2K3 151 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 KLRB1Q12918 225 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 IL18R1Q13478 541 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 PEX6Q13608 980 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 MESDQ14696 234 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 DCST2Q5T1A1 773 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 LRRC66Q68CR7 880 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 FAHD2BQ6P2I3 314 aaPredicted RBP3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 DOK6Q6PKX4 331 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 CLEC2AQ6UVW9 174 aa3.38□□□□□ -1.87
HMGN3P1-201ENST00000453847 RUFY3Q7L099 469 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms