RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FGF11Q92914 225 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 VMP1Q96GC9 406 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 LIN37Q96GY3 246 aaPredicted RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 DPYSL5Q9BPU6 564 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 POLDIP3Q9BY77 421 aaKnown RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 ADAP2Q9NPF8 381 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 IRAK4Q9NWZ3 460 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 EPHA6Q9UF33 1036 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 NTNG1Q9Y2I2 539 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ZFHX4Q86UP3 3567 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ADAMTS20P59510 1910 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CENPVL1A0A0U1RR11 272 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 AGAP5A6NIR3 686 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 EFCAB9A8MZ26 197 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 RDH16O75452 317 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 NTN1O95631 604 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 THY1P04216 161 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 THBS1P07996 1170 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ALOX5P09917 674 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CT62P0C5K7 136 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 NT5EP21589 574 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 GADD45AP24522 165 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 TGFBR1P36897 503 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 OPRL1P41146 370 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 RGS8P57771 180 aaPredicted RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 EFNB1P98172 346 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 HOXC5Q00444 222 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ST3GAL3Q11203 375 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 DUSP8Q13202 625 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 GINS1Q14691 196 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PRTGQ2VWP7 1150 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 SLC25A30Q5SVS4 291 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CCNJQ5T5M9 372 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 MEDAGQ5VYS4 303 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ZCCHC12Q6PEW1 402 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 RAB11FIP2Q7L804 512 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PRICKLE2Q7Z3G6 844 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PEX5LQ8IYB4 626 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 FAM26EQ8N5C1 309 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 TCEANCQ8N8B7 351 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CDRT4Q8N9R6 151 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CTHRC1Q96CG8 243 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 STACQ99469 402 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 STRADBQ9C0K7 418 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 RAB33BQ9H082 229 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 SAP130Q9H0E3 1048 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 DUSP22Q9NRW4 184 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CORINQ9Y5Q5 1042 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CCDC187A0A096LP49 1063 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PRKYO43930 277 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CNOT3O75175 753 aaKnown RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 OR5F1O95221 314 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 CDH3P22223 829 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 GRK5P34947 590 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 IFNGR2P38484 337 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 OMPP47874 163 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 GIPRP48546 466 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PCYT1AP49585 367 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 SEPHS1P49903 392 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 GABREP78334 506 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 FOXK2Q01167 660 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ZNF91Q05481 1191 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 TSPAN31Q12999 210 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 TRA2AQ13595 282 aaKnown RBP eCLIP9.93□□□□□ -0.827e-7■■□□□ 14
PKP4-206ENST00000452162 DOC2BQ14184 412 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 DECR1Q16698 335 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 DGUOKQ16854 277 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 DCST2Q5T1A1 773 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ACSM5Q6NUN0 579 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PLEKHM3Q6ZWE6 761 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 MRGPREQ86SM8 312 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 MEX3DQ86XN8 651 aaKnown RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 MCATQ8IVS2 390 aaKnown RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 ZNF619Q8N2I2 560 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 OR9A4Q8NGU2 314 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 FNDC8Q8TC99 324 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 HOXB13Q92826 284 aaPredicted RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 HSPBAP1Q96EW2 488 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ZDHHC12Q96GR4 267 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 SH3YL1Q96HL8 342 aaPredicted RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 MCHR1Q99705 422 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 MAP3K3Q99759 626 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PLA2G12AQ9BZM1 189 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ANKHQ9HCJ1 492 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PALMDQ9NP74 551 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 TBC1D23Q9NUY8 699 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 ETAA1Q9NY74 926 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 TVP23BQ9NYZ1 205 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 OSGIN1Q9UJX0 560 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 LOXL2Q9Y4K0 774 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 PCDHGA3Q9Y5H0 932 aa9.93□□□□□ -0.82
PKP4-206ENST00000452162 URB1O60287 2271 aaKnown RBP9.93□□□□□ -0.82
PKP4-206ENST00000452162 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 SLC9B1P1A6NJY1 282 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 C1QTNF9BB2RNN3 333 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 AP3D1O14617 1153 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 AIREO43918 545 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 KIAA0513O60268 411 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 MED26O95402 600 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms