RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MAP3K3Q99759 626 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 PRSS27Q9BQR3 290 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 ISG20L2Q9H9L3 353 aaKnown RBP13.75□□□□□ -0.21
SF1-211ENST00000448404 TIGARQ9NQ88 270 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 NLGN3Q9NZ94 848 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 CA14Q9ULX7 337 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 C2orf92A0A1B0GVN3 265 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 IMPA2O14732 288 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 LIMS3P0CW19 117 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 LIMS4P0CW20 117 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 MAOAP21397 527 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 SDC2P34741 201 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 UGT2B10P36537 528 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 CDH11P55287 796 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 ZNF155Q12901 538 aaPredicted RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 TSPAN31Q12999 210 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 LRIT3Q3SXY7 679 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 KLHL12Q53G59 568 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 PDZK1Q5T2W1 519 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 FHL5Q5TD97 284 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 C19orf48Q6RUI8 117 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 SIRT6Q8N6T7 355 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 OR51L1Q8NGJ5 315 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 ANKRD9Q96BM1 317 aaPredicted RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 SPACA7Q96KW9 195 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 KLHL28Q9NXS3 571 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 MMP17Q9ULZ9 603 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 TMEM184BQ9Y519 407 aaPredicted RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 C2orf74A8MZ97 194 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 CHST10O43529 356 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 GALR3O60755 368 aaPredicted RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 KCNJ13O60928 360 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 SNX4O95219 450 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 ALOX5P09917 674 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 NOS3P29474 1203 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 ATP6V1E1P36543 226 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 GFERP55789 205 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 UBE2IP63279 158 aaKnown RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 EEF1A1P68104 462 aaKnown RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 MGAT2Q10469 447 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 HNRNPA0Q13151 305 aaKnown RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 PRICKLE4Q2TBC4 344 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 ABHD13Q7L211 337 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 GATAD2AQ86YP4 633 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 TMEM151BQ8IW70 566 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 OR8H2Q8N162 312 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 NELL2Q99435 816 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 LRRC61Q9BV99 259 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 TP63Q9H3D4 680 aaPredicted RBP13.74□□□□□ -0.21
SF1-211ENST00000448404 TRPV5Q9NQA5 729 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 KLK4Q9Y5K2 254 aa13.74□□□□□ -0.21
SF1-211ENST00000448404 SHISA3A0PJX4 238 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 RAB36O95755 333 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 IFI30P13284 250 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 PSMA1P25786 263 aaKnown RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 SLC9A3P48764 834 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 HCCSP53701 268 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 TUBA1BP68363 451 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 NCF4Q15080 339 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 OR1Q1Q15612 314 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 OCLNQ16625 522 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 CRTC2Q53ET0 693 aaPredicted RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 TUBA1AQ71U36 451 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 POGLUT1Q8NBL1 392 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 ACOT11Q8WXI4 607 aaPredicted RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 MTHFD2LQ9H903 347 aaPredicted RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 ABCB9Q9NP78 766 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 TXNL4BQ9NX01 149 aaKnown RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 PHF11Q9UIL8 331 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 HEATR5AQ86XA9 2040 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 RP1P56715 2156 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 SPTY2D1-AS1A0A0U1RR47 76 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 TNFSF14O43557 240 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 OR10H2O60403 315 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 GPR75O95800 540 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 CBX7O95931 251 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 WNT1P04628 370 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 TSPAN19P0C672 248 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 MSL3P1P0C860 447 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 TBXA2RP21731 343 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 ARPC4P59998 168 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 MRPS21P82921 87 aaKnown RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 RHAGQ02094 409 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 GNA13Q14344 377 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 C9orf43Q8TAL5 461 aaPredicted RBP13.73□□□□□ -0.21
SF1-211ENST00000448404 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 GPBAR1Q8TDU6 330 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 ZDHHC1Q8WTX9 485 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 OR51V1Q9H2C8 321 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 PCDHGB6Q9Y5F9 930 aa13.73□□□□□ -0.21
SF1-211ENST00000448404 CD8B2A6NJW9 211 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 C4orf47A7E2U8 309 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 SERPINI2O75830 405 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 CD8BP10966 210 aa13.72□□□□□ -0.21
SF1-211ENST00000448404 PIPP12273 146 aaPredicted RBP13.72□□□□□ -0.21
SF1-211ENST00000448404 CELP19835 753 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms