RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ZNF367Q7RTV3 350 aa6.92□□□□□ -1.3
SYNE1-213ENST00000448038 SENP5Q96HI0 755 aaPredicted RBP6.92□□□□□ -1.3
SYNE1-213ENST00000448038 HCRTR1O43613 425 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GALR3O60755 368 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GPX2P18283 190 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PYCR1P32322 319 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LEXMQ3ZCV2 418 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 FCRLBQ6BAA4 426 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 TCEAL6Q6IPX3 200 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LIN54Q6MZP7 749 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 MFSD12Q6NUT3 480 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PLET1Q6UQ28 207 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SLC16A11Q8NCK7 471 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 CNN2Q99439 309 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 TTYH2Q9BSA4 534 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 B3GNT4Q9C0J1 378 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 EVA1AQ9H8M9 152 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SLC6A20Q9NP91 592 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 TMEM9BQ9NQ34 198 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SULT2B1O00204 365 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ZNF195O14628 629 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 NSA2O95478 260 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ETHE1O95571 254 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 BMP1P13497 986 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 MAPK3P27361 379 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GDF1P27539 372 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SOX2P48431 317 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PDX1P52945 283 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SCN1BQ07699 218 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 OR7A5Q15622 319 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LIPKQ5VXJ0 399 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LRRC69Q6ZNQ3 347 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LINGO2Q7L985 606 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ZER1Q7Z7L7 766 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ZNF101Q8IZC7 436 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 CYB561A3Q8NBI2 242 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 OR51L1Q8NGJ5 315 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 EDEM2Q9BV94 578 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 CHMP1AQ9HD42 196 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GPR83Q9NYM4 423 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SEC14L4Q9UDX3 406 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 TESQ9UGI8 421 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 POMT2Q9UKY4 750 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SH3D21A4FU49 640 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LILRA5A6NI73 299 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 VSTM5A8MXK1 200 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PCDH17O14917 1159 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 OPN1LWP04000 364 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 HTR3AP46098 478 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GDI2P50395 445 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 HLCSP50747 726 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 MED25Q71SY5 747 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 UBE2Q1Q7Z7E8 422 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 DUSP19Q8WTR2 217 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 MSLNLQ96KJ4 702 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LIN28AQ9H9Z2 209 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 DIABLOQ9NR28 239 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 KCND3Q9UK17 655 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PCDHGB5Q9Y5G0 923 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 IER3IP1Q9Y5U9 82 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SLC22A7Q9Y694 548 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ADAM23O75077 832 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PTPRFP10586 1907 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 CASP6P55212 293 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 RAB14P61106 215 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 DMPKQ09013 629 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 E2F2Q14209 437 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SPHARQ15513 63 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 LRFN4Q6PJG9 635 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 RAB11FIP2Q7L804 512 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 CPOQ8IVL8 374 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GPALPP1Q8IXQ4 340 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ALDH16A1Q8IZ83 802 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ANKK1Q8NFD2 765 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 OR7G1Q8NGA0 311 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 HTRA1Q92743 480 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 MGLLQ99685 303 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 IER2Q9BTL4 223 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SPNS1Q9H2V7 528 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 A4GALTQ9NPC4 353 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ACAD8Q9UKU7 415 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 CSNK1G3Q9Y6M4 447 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 IGHV3-20A0A0C4DH32 117 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SMIM30A4D0T7 59 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 SERINC4A6NH21 518 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 HCKP08631 526 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PABPC4LP0CB38 370 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 ACVR1BP36896 505 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GPR3P46089 330 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 AP3S2P59780 193 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GAB1Q13480 694 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 TRMT12Q53H54 448 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PRAMEF20Q5VT98 475 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 DLEU7Q6UYE1 221 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 PJA1Q8NG27 643 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 C1orf216Q8TAB5 229 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 GATAD2BQ8WXI9 593 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 C12orf43Q96C57 262 aaKnown RBP6.91□□□□□ -1.3
SYNE1-213ENST00000448038 NXPE2Q96DL1 559 aa6.91□□□□□ -1.3
SYNE1-213ENST00000448038 COX14Q96I36 57 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms