RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 SNX8Q9Y5X2 465 aa12.14□□□□□ -0.47
GARNL3-206ENST00000439286 PTGDR2Q9Y5Y4 395 aa12.14□□□□□ -0.47
GARNL3-206ENST00000439286 NCKAP5O14513 1909 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TLDC2A0PJX2 215 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 C7orf72A4D263 438 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 GJE1A6NN92 205 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TNFSF11O14788 317 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ADAMDEC1O15204 470 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 HEXAP06865 529 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TUBBP07437 444 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ACP2P11117 423 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 MAP3K8P41279 467 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 SLC6A8P48029 635 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 DUSP5Q16690 384 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 SPDYE7PQ495Y7 208 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ZNF385BQ569K4 471 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TMEM201Q5SNT2 666 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 LILRA2Q8N149 483 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 NATD1Q8N6N6 113 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ADAMTS15Q8TE58 950 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TMEM171Q8WVE6 324 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 HOXB13Q92826 284 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-206ENST00000439286 OSTF1Q92882 214 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ARL8AQ96BM9 186 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 GIMAP5Q96F15 307 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 FCRL1Q96LA6 429 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 PPP3R2Q96LZ3 170 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
GARNL3-206ENST00000439286 GATA5Q9BWX5 397 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-206ENST00000439286 BTBD2Q9BX70 525 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 C12orf65Q9H3J6 166 aaKnown RBP12.13□□□□□ -0.47
GARNL3-206ENST00000439286 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TMEM185BQ9H7F4 350 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 NTMQ9P121 344 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 FAF1Q9UNN5 650 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-206ENST00000439286 GPR52Q9Y2T5 361 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 TRAF6Q9Y4K3 522 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 DNAJC15Q9Y5T4 150 aa12.13□□□□□ -0.47
GARNL3-206ENST00000439286 ZFHX3Q15911 3703 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 H7C1Q1 480 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 GTPBP1O00178 669 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 LSM1O15116 133 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 SIAH2O43255 324 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 FGF4P08620 206 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 KRT16P08779 473 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 BCKDHAP12694 445 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 CCKARP32238 428 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 FRKP42685 505 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 PDE7AQ13946 482 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 MLC1Q15049 377 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 GUSBP1Q15486 140 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 PLPPR5Q32ZL2 321 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 KANK2Q63ZY3 851 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 ALKBH2Q6NS38 261 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 MTERF4Q7Z6M4 381 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 TRABD2AQ86V40 505 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 WFDC8Q8IUA0 241 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 KRTAP1-3Q8IUG1 177 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 OR2T11Q8NH01 316 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 PHOSPHO1Q8TCT1 267 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 TWIST2Q8WVJ9 160 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
GARNL3-206ENST00000439286 C16orf58Q96GQ5 468 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 KLHL15Q96M94 604 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 STACQ99469 402 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 HDHD5Q9BXW7 423 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 PIGUQ9H490 435 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 C12orf49Q9H741 205 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 MED13LQ71F56 2210 aa12.12□□□□□ -0.47
GARNL3-206ENST00000439286 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 NPHS1O60500 1241 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 PEX11AO75192 247 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 HMGN2P05204 90 aaKnown RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 EFNA1P20827 205 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ADH6P28332 368 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 SFTPDP35247 375 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 TP53BP2Q13625 1128 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 PCLAFQ15004 111 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 RNPS1Q15287 305 aaKnown RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ATP6AP1LQ52LC2 224 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 CCNJQ5T5M9 372 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 BHLHB9Q6PI77 547 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 STAC2Q6ZMT1 411 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 ZNF704Q6ZNC4 412 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-206ENST00000439286 STEAP2Q8NFT2 490 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 OR56A1Q8NGH5 318 aa12.11□□□□□ -0.47
GARNL3-206ENST00000439286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms