RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 A0A087WV48 116 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 GTPBP1O00178 669 aaKnown RBP18.97■□□□□ 0.63
CHD3-204ENST00000439235 SCO2O43819 266 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 CEACAM4O75871 244 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 KRT36O76013 467 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 EPPINO95925 133 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 RGS8P57771 180 aaPredicted RBP18.97■□□□□ 0.63
CHD3-204ENST00000439235 SNTA1Q13424 505 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 LINC00696Q6ZRV3 163 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 CARM1Q86X55 608 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 ZDHHC21Q8IVQ6 265 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 ZNF440Q8IYI8 595 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 CLIP4Q8N3C7 705 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 VANGL1Q8TAA9 524 aaPredicted RBP18.97■□□□□ 0.63
CHD3-204ENST00000439235 PHOSPHO1Q8TCT1 267 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 PAQR8Q8TEZ7 354 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 SLCO4A1Q96BD0 722 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 CHID1Q9BWS9 393 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 OSBPL11Q9BXB4 747 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 RSPO3Q9BXY4 272 aaPredicted RBP18.97■□□□□ 0.63
CHD3-204ENST00000439235 RNF32Q9H0A6 362 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 ZNF552Q9H707 407 aaPredicted RBP18.97■□□□□ 0.63
CHD3-204ENST00000439235 IL1RAPQ9NPH3 570 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 SDHAF3Q9NRP4 125 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 RLIMQ9NVW2 624 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 CNIH4Q9P003 139 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 CHST2Q9Y4C5 530 aa18.97■□□□□ 0.63
CHD3-204ENST00000439235 M0R3H8 397 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 HNRNPRO43390 633 aaKnown RBP18.96■□□□□ 0.63
CHD3-204ENST00000439235 ANGPTL1O95841 491 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 FCGR1AP12314 374 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 ITGA2P17301 1181 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 TNFRSF1BP20333 461 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 MAGEA2P43356 314 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 OR1E2P47887 323 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 RNF144AP50876 292 aaPredicted RBP18.96■□□□□ 0.63
CHD3-204ENST00000439235 TUBA3CQ13748 450 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 CD226Q15762 336 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 ZNF468Q5VIY5 522 aaPredicted RBP18.96■□□□□ 0.63
CHD3-204ENST00000439235 SLC22A10Q63ZE4 541 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 TUBA3EQ6PEY2 450 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 APOOLQ6UXV4 268 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 ZNF550Q7Z398 422 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 MARCH3Q86UD3 253 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 COMTD1Q86VU5 262 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 GATSQ8NAP1 163 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 FDCSPQ8NFU4 85 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 CPNE5Q9HCH3 593 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 SH2D2AQ9NP31 389 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 EXOSC3Q9NQT5 275 aaKnown RBP18.96■□□□□ 0.63
CHD3-204ENST00000439235 ANKRD10Q9NXR5 420 aa18.96■□□□□ 0.63
CHD3-204ENST00000439235 DNAJB12Q9NXW2 375 aaKnown RBP18.96■□□□□ 0.63
CHD3-204ENST00000439235 RALYQ9UKM9 306 aaKnown RBP18.96■□□□□ 0.63
CHD3-204ENST00000439235 ZNF264O43296 627 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 EIF4E2O60573 245 aaKnown RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 WDPCPO95876 746 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 P04436 131 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 UBTFL6P0CB48 400 aaPredicted RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 CASP3P42574 277 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 ST13P50502 369 aaKnown RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 VLDLRP98155 873 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 RIPK1Q13546 671 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 SLC30A6Q6NXT4 461 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 PIWIL3Q7Z3Z3 882 aaKnown RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 RANBP3LQ86VV4 465 aaPredicted RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 FAM71CQ8NEG0 241 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 CNOT9Q92600 299 aaKnown RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 C7orf34Q96L11 122 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 TIMMDC1Q9NPL8 285 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 LRFN1Q9P244 771 aa18.95■□□□□ 0.62
CHD3-204ENST00000439235 CNOT11Q9UKZ1 510 aaKnown RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 MAP1BP46821 2468 aaKnown RBP18.95■□□□□ 0.62
CHD3-204ENST00000439235 ANKRD33BA6NCL7 494 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 OR5H15A6NDH6 313 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 H3BNX3 289 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 hCG_2039718K7EN88 272 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 MGRN1O60291 552 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 CYP7B1O75881 506 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 CCL3P10147 92 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 ITPKBP27987 946 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 CD96P40200 585 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 C17orf67Q0P5P2 114 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 RCN1Q15293 331 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 BORAQ6PGQ7 559 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 DEF8Q6ZN54 512 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 CYP4Z1Q86W10 505 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 TMCO5AQ8N6Q1 288 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 OR6T1Q8NGN1 323 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 ZNF347Q96SE7 839 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 ANGPTL4Q9BY76 406 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 LAT2Q9GZY6 243 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 DCLRE1BQ9H816 532 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 SACM1LQ9NTJ5 587 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 TESQ9UGI8 421 aaKnown RBP18.94■□□□□ 0.62
CHD3-204ENST00000439235 FAM32AQ9Y421 112 aaKnown RBP18.94■□□□□ 0.62
CHD3-204ENST00000439235 WIF1Q9Y5W5 379 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 ENPP4Q9Y6X5 453 aa18.94■□□□□ 0.62
CHD3-204ENST00000439235 H0Y3Z8 333 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 AP3D1O14617 1153 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 FRS3O43559 492 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms