RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CYR61O00622 381 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 GALR3O60755 368 aaPredicted RBP9.68□□□□□ -0.86
CD44-210ENST00000434472 RGS9O75916 674 aaPredicted RBP9.68□□□□□ -0.86
CD44-210ENST00000434472 LYPD3O95274 346 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 IFI30P13284 250 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 BMP8BP34820 402 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 MAP3K8P41279 467 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 HTR3AP46098 478 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 RABIFP47224 123 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CTBP2P56545 445 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 TAS2R43P59537 309 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 SHHQ15465 462 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 RAB30Q15771 203 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 PRICKLE4Q2TBC4 344 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 MRPL2Q5T653 305 aaKnown RBP9.68□□□□□ -0.86
CD44-210ENST00000434472 GARNL3Q5VVW2 1013 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 SPATC1Q76KD6 591 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 DGLUCYQ7Z3D6 616 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 BMP8AQ7Z5Y6 402 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 OOSP2Q86WS3 158 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CA13Q8N1Q1 262 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 LNX2Q8N448 690 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CAMKK1Q8N5S9 505 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 ARIH2OSQ8N7S6 290 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 GPBAR1Q8TDU6 330 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 MRGPRX1Q96LB2 322 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 TM9SF2Q99805 663 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 ZNF649Q9BS31 505 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 S1PR5Q9H228 398 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 C8orf33Q9H7E9 229 aaPredicted RBP9.68□□□□□ -0.86
CD44-210ENST00000434472 CMC2Q9NRP2 79 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 BABAM2Q9NXR7 383 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 MAT2BQ9NZL9 334 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CA5BQ9Y2D0 317 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CSNK1G3Q9Y6M4 447 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 DOCK8Q8NF50 2099 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 LOC105369274A0A096LPK9 316 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 LOC102723532A0A0G2JNH3 316 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 BLACEA4D250 179 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 HTR3EA5X5Y0 456 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 HMX3A6NHT5 357 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 PRR23D1E9PI22 279 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 H0Y8X5 98 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 BHLHE40O14503 412 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SOCS6O14544 535 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CDC42EP2O14613 210 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 FGF17O60258 216 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 BRINP1O60477 761 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NKX2-2O95096 273 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CSF3P09919 207 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ZGLP1P0C6A0 271 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SLC35E2P0CK97 266 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 PRR23D2P0DMB1 279 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 CELP19835 753 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 DRD5P21918 477 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 AZGP1P25311 298 aaKnown RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 HTR2AP28223 471 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 PBX2P40425 430 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 RBM34P42696 430 aaKnown RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 RFX2P48378 723 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MTNR1BP49286 362 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 UBE2IP63279 158 aaKnown RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 ADAM15Q13444 863 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 HTR4Q13639 388 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 RIN1Q13671 783 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 GAS6Q14393 721 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MAPK14Q16539 360 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CARTPTQ16568 116 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NDUFA5Q16718 116 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ZNF791Q3KP31 576 aaPredicted RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 ZMAT1Q5H9K5 638 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SLC35F1Q5T1Q4 408 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CCNJQ5T5M9 372 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MZT2BQ6NZ67 158 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NIPAL3Q6P499 406 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SMARCD3Q6STE5 483 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 RDH10Q8IZV5 341 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 OR4N4Q8N0Y3 316 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 VWA5B2Q8N398 1253 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CSNK1A1LQ8N752 337 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 BBS1Q8NFJ9 593 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SLC2A12Q8TD20 617 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 FAM3CQ92520 227 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 SLC35B4Q969S0 331 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 OTULINQ96BN8 352 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 DEPDC7Q96QD5 511 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ATF6BQ99941 703 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 DPH1Q9BZG8 443 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TRIM2Q9C040 744 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 RERGLQ9H628 205 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 CPNE7Q9UBL6 633 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 PCDHGB7Q9Y5F8 929 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 MDC1Q14676 2089 aaKnown RBP9.67□□□□□ -0.86
CD44-210ENST00000434472 DAPL1A0PJW8 107 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 ZNF860A6NHJ4 632 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 RIIAD1A6NNX1 92 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 RNF13O43567 381 aa9.67□□□□□ -0.86
CD44-210ENST00000434472 NARSO43776 548 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms