RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.86□□□□□ -1.31
BDNF-209ENST00000420794 SLC38A1Q9H2H9 487 aa6.86□□□□□ -1.31
BDNF-209ENST00000420794 ZNF160Q9HCG1 818 aa6.86□□□□□ -1.31
BDNF-209ENST00000420794 LRRC42Q9Y546 428 aa6.86□□□□□ -1.31
BDNF-209ENST00000420794 RP1P56715 2156 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 A0A087WXM4 84 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 PTGES3LE9PB15 166 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 CLPTM1O96005 669 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 HMGN1P05114 100 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 GKN3PP0CG01 181 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 PNMTP11086 282 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 MMP11P24347 488 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 GABRA4P48169 554 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 CENPAP49450 140 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 PNLIPRP2P54317 469 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 SLC26A5P58743 744 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 INSM1Q01101 510 aaPredicted RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 PLGLB1Q02325 96 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 CEBPEQ15744 281 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 ULK3Q6PHR2 472 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 IL20RBQ6UXL0 311 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 OLIG3Q7RTU3 272 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 PIWIL3Q7Z3Z3 882 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 ASCC3Q8N3C0 2202 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 FAM86B1Q8N7N1 296 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 BPIFB6Q8NFQ5 453 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 MRPL48Q96GC5 212 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 LMF2Q9BU23 707 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 GRIP2Q9C0E4 1043 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 POLR2J2Q9GZM3 115 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 ZNF350Q9GZX5 532 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 EPS8L2Q9H6S3 715 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 USE1Q9NZ43 259 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 B4GALT7Q9UBV7 327 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 LOC100130705A0A1B0GUX0 176 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 H0YAE9 185 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 DLL1O00548 723 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 GDF9O60383 454 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 CNOT3O75175 753 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 DUSP2Q05923 314 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 IL18R1Q13478 541 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 CBFBQ13951 182 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 ENTPD8Q5MY95 495 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 NUP54Q7Z3B4 507 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 SVOPQ8N4V2 548 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 TP53INP1Q96A56 240 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 ZHX1-C8orf76Q96EF9 292 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 NDUFAF4Q9P032 175 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 ATPIF1Q9UII2 106 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 DKKL1Q9UK85 242 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 LYVE1Q9Y5Y7 322 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 KCNE3Q9Y6H6 103 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 EFCAB9A8MZ26 197 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 MCIDASD6RGH6 385 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 SOCS2O14508 198 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 CDX4O14627 284 aaPredicted RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 CSRP1P21291 193 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 TCEA1P23193 301 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 SMSP52788 366 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 LGALS3BPQ08380 585 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 C17orf67Q0P5P2 114 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 SNTA1Q13424 505 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 LILRA2Q8N149 483 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 FAM98AQ8NCA5 519 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 CHDHQ8NE62 594 aaPredicted RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 OR6T1Q8NGN1 323 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 ACOT11Q8WXI4 607 aaPredicted RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 OSTF1Q92882 214 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 LIN28AQ9H9Z2 209 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 CCNB1IP1Q9NPC3 277 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 RASSF1Q9NS23 344 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 LANCL2Q9NS86 450 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 TCFL5Q9UL49 500 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 GPR55Q9Y2T6 319 aaPredicted RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 YARS2Q9Y2Z4 477 aaKnown RBP6.85□□□□□ -1.31
BDNF-209ENST00000420794 FANCMQ8IYD8 2048 aa6.85□□□□□ -1.31
BDNF-209ENST00000420794 RIIAD1A6NNX1 92 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 MAN1A2O60476 641 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 IL33O95760 270 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 CEACAM1P13688 526 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 EMDP50402 254 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 CSNK2BP67870 215 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 HOXC5Q00444 222 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 KCNAB2Q13303 367 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 OR1Q1Q15612 314 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 PRSS53Q2L4Q9 553 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 WBP2NLQ6ICG8 309 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 TYW3Q6IPR3 259 aaKnown RBP6.84□□□□□ -1.31
BDNF-209ENST00000420794 RPL13AP3Q6NVV1 102 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 FRRS1Q6ZNA5 592 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 SUMF1Q8NBK3 374 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 CT55Q8WUE5 264 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 PTPMT1Q8WUK0 201 aaPredicted RBP6.84□□□□□ -1.31
BDNF-209ENST00000420794 IFT27Q9BW83 186 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 AMBRA1Q9C0C7 1298 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 TIMMDC1Q9NPL8 285 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 RLIMQ9NVW2 624 aa6.84□□□□□ -1.31
BDNF-209ENST00000420794 SLC7A7Q9UM01 511 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms