RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LIMK1P53667 647 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 RAD23AP54725 363 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 RPS15P62841 145 aaKnown RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 LSM11P83369 360 aaKnown RBP eCLIP11.46□□□□□ -0.587e-8■□□□□ 11.1
CHMP3-204ENST00000409727 KCNAB2Q13303 367 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 FGFBP1Q14512 234 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 CD226Q15762 336 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 SLC36A3Q495N2 470 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 KDM4DQ6B0I6 523 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 FAHD1Q6P587 224 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 KIRREL2Q6UWL6 708 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 MEX3DQ86XN8 651 aaKnown RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 NLGN4XQ8N0W4 816 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 SLC34A3Q8N130 599 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 ESX1Q8N693 406 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF527Q8NB42 609 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 PIK3C3Q8NEB9 887 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 NLGN4YQ8NFZ3 816 aaPredicted RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 OCEL1Q9H607 264 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF160Q9HCG1 818 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 UBQLN4Q9NRR5 601 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 MAN2C1Q9NTJ4 1040 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 DNAJB12Q9NXW2 375 aaKnown RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 PPIEQ9UNP9 301 aaKnown RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 FARSAQ9Y285 508 aaKnown RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 SERINC4A6NH21 518 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF354AO60765 605 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-204ENST00000409727 ADAM11O75078 769 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 UGT2B11O75310 529 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 GASTP01350 101 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 GUSBP08236 651 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 CSRP1P21291 193 aaKnown RBP11.45□□□□□ -0.58
CHMP3-204ENST00000409727 F8A1P23610 371 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 MMP11P24347 488 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 IFNA8P32881 189 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 NRG3P56975 720 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 SMIM11AP58511 58 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 KLHL26Q53HC5 615 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 APOOLQ6UXV4 268 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 GDF7Q7Z4P5 450 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 CHERPQ8IWX8 916 aaKnown RBP11.45□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF555Q8NEP9 628 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 OR11G2Q8NGC1 345 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 PHOSPHO1Q8TCT1 267 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 GRHL3Q8TE85 626 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 HSPBAP1Q96EW2 488 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 SLC41A3Q96GZ6 507 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 DHRS1Q96LJ7 313 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 DEFB126Q9BYW3 111 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF700Q9H0M5 742 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF556Q9HAH1 456 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 FAM118AQ9NWS6 357 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 SLC7A7Q9UM01 511 aa11.45□□□□□ -0.58
CHMP3-204ENST00000409727 MRPS18BQ9Y676 258 aaKnown RBP11.45□□□□□ -0.58
CHMP3-204ENST00000409727 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 A0A1W2PRQ8 180 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TMEM200CA6NKL6 621 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 C17orf51A8MQB3 221 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 FAAHO00519 579 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 SOCS6O14544 535 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TO15178 435 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TSPAN2O60636 221 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 RAD1O60671 282 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 OR2J2O76002 312 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 ZFAND5O76080 213 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 THY1P04216 161 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 GSSP48637 474 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 KNTC1P50748 2209 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 CCR4P51679 360 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 FBXW4P57775 412 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 ST3GAL3Q11203 375 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 DNASE1L3Q13609 305 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 DGCR6Q14129 220 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 OR1Q1Q15612 314 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 RIF1Q5UIP0 2472 aaKnown RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 AP1ARQ63HQ0 302 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 KRT80Q6KB66 452 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 PPP1R32Q7Z5V6 425 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TMPRSS12Q86WS5 348 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 NKAIN4Q8IVV8 208 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 CADM2Q8N3J6 435 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TMCO5AQ8N6Q1 288 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 C17orf47Q8NEP4 570 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 OR5L2Q8NGL0 311 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 NUBPLQ8TB37 319 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 TP53INP1Q96A56 240 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 ANKRD60Q9BZ19 345 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 RTN4RQ9BZR6 473 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 HOXD1Q9GZZ0 328 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 PAPOLBQ9NRJ5 636 aaKnown RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 PCDHGA6Q9Y5G7 932 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 NPFFR2Q9Y5X5 522 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 SH3PXD2BA1X283 911 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 STMND1H3BQB6 276 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 GTPBP1O00178 669 aaKnown RBP11.44□□□□□ -0.58
CHMP3-204ENST00000409727 SCO2O43819 266 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 CD63P08962 238 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 RAB40ALP0C0E4 278 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 CEACAM1P13688 526 aa11.44□□□□□ -0.58
CHMP3-204ENST00000409727 ANXA8P13928 327 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms