RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TMEM44Q2T9K0 475 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 AGKQ53H12 422 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 COX20Q5RI15 118 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 C6orf10Q5SRN2 563 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 CGB2Q6NT52 195 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 SLC2A7Q6PXP3 512 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 ENPP6Q6UWR7 440 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 DNAJC14Q6Y2X3 702 aaPredicted RBP17.4■□□□□ 0.38
RTN4-207ENST00000402434 GATSQ8NAP1 163 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 OIT3Q8WWZ8 545 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 ROPN1LQ96C74 230 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 SFXN2Q96NB2 322 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 PAIP1Q9H074 479 aaKnown RBP17.4■□□□□ 0.38
RTN4-207ENST00000402434 TPT1P8Q9HAU6 139 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 LIPT1Q9Y234 373 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 RPH3AQ9Y2J0 694 aaPredicted RBP17.4■□□□□ 0.38
RTN4-207ENST00000402434 PCDHB14Q9Y5E9 798 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 LINC01387J3KSC0 135 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 ANP32DO95626 131 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 VIMP08670 466 aaKnown RBP17.39■□□□□ 0.37
RTN4-207ENST00000402434 GLI4P10075 376 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 CD1EP15812 388 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 HK1P19367 917 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 CAPN3P20807 821 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 LHX2P50458 406 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 NUP107P57740 925 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 GPR68Q15743 365 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 ZNF630Q2M218 657 aaPredicted RBP17.39■□□□□ 0.37
RTN4-207ENST00000402434 GTDC1Q4AE62 458 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 C1orf185Q5T7R7 199 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 ARSKQ6UWY0 536 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 RND1Q92730 232 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 TRNT1Q96Q11 434 aaKnown RBP17.39■□□□□ 0.37
RTN4-207ENST00000402434 TMEM120AQ9BXJ8 343 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 MKLN1Q9UL63 735 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 WDR45Q9Y484 360 aa17.39■□□□□ 0.37
RTN4-207ENST00000402434 A0A096LPI6 279 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 A0A1W2PP18 115 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 H3BNH8 94 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 NR5A2O00482 541 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 KIAA0513O60268 411 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 UGT2B17O75795 530 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 EPPINO95925 133 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 ADH7P40394 386 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 SF3B4Q15427 424 aaKnown RBP eCLIP17.38■□□□□ 0.379e-8■■■□□ 17.1
RTN4-207ENST00000402434 CDSNQ15517 529 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 BCL2A1Q16548 175 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 ACSF3Q4G176 576 aaPredicted RBP17.38■□□□□ 0.37
RTN4-207ENST00000402434 LRIF1Q5T3J3 769 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 TYW3Q6IPR3 259 aaKnown RBP17.38■□□□□ 0.37
RTN4-207ENST00000402434 FRRS1Q6ZNA5 592 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 OLIG3Q7RTU3 272 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 PNPT1Q8TCS8 783 aaKnown RBP17.38■□□□□ 0.37
RTN4-207ENST00000402434 PHOSPHO1Q8TCT1 267 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 ZPLD1Q8TCW7 415 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 AURKBQ96GD4 344 aaPredicted RBP17.38■□□□□ 0.37
RTN4-207ENST00000402434 ZNF317Q96PQ6 595 aaPredicted RBP17.38■□□□□ 0.37
RTN4-207ENST00000402434 ICAM5Q9UMF0 924 aa17.38■□□□□ 0.37
RTN4-207ENST00000402434 KLF2Q9Y5W3 355 aaPredicted RBP17.38■□□□□ 0.37
RTN4-207ENST00000402434 A0A087WZY1 265 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 HCRTR2O43614 444 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 ZNF708P17019 499 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 STARP49675 285 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CLDN18P56856 261 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 ZNF117Q03924 483 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 PAGE3Q5JUK9 113 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 PDZK1Q5T2W1 519 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SEM1Q6ZVN7 128 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 B4GALNT2Q8NHY0 566 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 TSPEARQ8WU66 669 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 ZG16BQ96DA0 208 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SH3YL1Q96HL8 342 aaPredicted RBP17.37■□□□□ 0.37
RTN4-207ENST00000402434 PIGQQ9BRB3 760 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SLC25A37Q9NYZ2 338 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 COQ3Q9NZJ6 369 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CAMK2AQ9UQM7 478 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 GMEB1Q9Y692 573 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CACNA1CQ13936 2221 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CENPVL1A0A0U1RR11 272 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 OR2M5A3KFT3 312 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 C7orf72A4D263 438 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SERINC4A6NH21 518 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CLIC1O00299 241 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 TNFRSF21O75509 655 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 H6PDO95479 791 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 TCEA1P23193 301 aaKnown RBP17.37■□□□□ 0.37
RTN4-207ENST00000402434 ARFIP2P53365 341 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 MAPK14Q16539 360 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SYPL1Q16563 259 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 RAET1LQ5VY80 246 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 NSUN5P2Q63ZY6 315 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CBLN3Q6UW01 205 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 ADGRE4PQ86SQ3 457 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 ZNF619Q8N2I2 560 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 ANKFN1Q8N957 763 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 PMM1Q92871 262 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SDCCAG3Q96C92 435 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 KLHDC3Q9BQ90 382 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 SLC38A1Q9H2H9 487 aa17.37■□□□□ 0.37
RTN4-207ENST00000402434 CALHM2Q9HA72 323 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms