RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 POGLUT1Q8NBL1 392 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 SLC26A7Q8TE54 656 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 PROX1Q92786 737 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 SGCZQ96LD1 299 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 PSD2Q9BQI7 771 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 LAT2Q9GZY6 243 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 CDCP1Q9H5V8 836 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 CCDC86Q9H6F5 360 aaKnown RBP6.29□□□□□ -1.4
USP16-203ENST00000399975 CNIH4Q9P003 139 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 MKLN1Q9UL63 735 aa6.29□□□□□ -1.4
USP16-203ENST00000399975 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
USP16-203ENST00000399975 ZFHX2Q9C0A1 2572 aaPredicted RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 TRIM64A6NGJ6 449 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PRAMEF25A6NGN4 478 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 TP53I11O14683 189 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ZNF354AO60765 605 aaPredicted RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 UGT2B11O75310 529 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ITGA10O75578 1167 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 REM1O75628 298 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 OR2J2O76002 312 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 THRBP10828 461 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PTGDSP41222 190 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 CLK3P49761 638 aaKnown RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 UCNP55089 124 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 SUMO3P55854 103 aaPredicted RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 TUBA4AP68366 448 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PLAURQ03405 335 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 GPR68Q15743 365 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 TBCELQ5QJ74 424 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 SLC30A6Q6NXT4 461 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 RTL4Q6ZR62 310 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 VRK2Q86Y07 508 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 CROCCP3Q8IVE0 287 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PQLC1Q8N2U9 271 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 CLEC1AQ8NC01 280 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ADAMTS16Q8TE57 1224 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PAQR8Q8TEZ7 354 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ZG16BQ96DA0 208 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ARSGQ96EG1 525 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 THOC3Q96J01 351 aaKnown RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 AGPAT4Q9NRZ5 378 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 KLHL28Q9NXS3 571 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 DNAJB12Q9NXW2 375 aaKnown RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 SLC9A8Q9Y2E8 581 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ENPP4Q9Y6X5 453 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 WWP2O00308 870 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ETV2O00321 342 aaPredicted RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 SCDO00767 359 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 NKX2-8O15522 239 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 TPST1O60507 370 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ICOSLGO75144 302 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ZNF682O95780 498 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 FABP3P05413 133 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ATXN8OSP0DMR3 200 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 RHCEP18577 417 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 SPINK2P20155 84 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 MSX1P28360 303 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 AQP1P29972 269 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 EVI2BP34910 448 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 HMGA2P52926 109 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 NR1H2P55055 460 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 MFAP5Q13361 173 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 NPTX1Q15818 432 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ACER2Q5QJU3 275 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PDZK1Q5T2W1 519 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ZNF550Q7Z398 422 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ICA1LQ8NDH6 482 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 OR4C3Q8NH37 302 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 BRIX1Q8TDN6 353 aaKnown RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 EFHD2Q96C19 240 aaPredicted RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 NRBF2Q96F24 287 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 CHID1Q9BWS9 393 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ANGPTL4Q9BY76 406 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ANKRD19PQ9H560 264 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 C8orf4Q9NR00 106 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 ABI3Q9P2A4 366 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 DNAJB9Q9UBS3 223 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 TESQ9UGI8 421 aaKnown RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 TEKT2Q9UIF3 430 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 RIMS3Q9UJD0 308 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PCDHGB7Q9Y5F8 929 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 PCDHGB6Q9Y5F9 930 aa6.28□□□□□ -1.4
USP16-203ENST00000399975 CHCHD2Q9Y6H1 151 aaPredicted RBP6.28□□□□□ -1.4
USP16-203ENST00000399975 CENPVL1A0A0U1RR11 272 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 TRIM64BA6NI03 449 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 H3BNH8 94 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 IL7RP16871 459 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 SOX3P41225 446 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 SLC6A8P48029 635 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 ALDH3B2P48448 385 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 ZNF136P52737 540 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 AQP4P55087 323 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 SKP2Q13309 424 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 MRPL2Q5T653 305 aaKnown RBP6.27□□□□□ -1.41
USP16-203ENST00000399975 BROXQ5VW32 411 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 OLIG3Q7RTU3 272 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 VTCN1Q7Z7D3 282 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 COMTD1Q86VU5 262 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 CARM1Q86X55 608 aa6.27□□□□□ -1.41
USP16-203ENST00000399975 ZDHHC21Q8IVQ6 265 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms