RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 COMTD1Q86VU5 262 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 CHRDQ9H2X0 955 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 HAO2Q9NYQ3 351 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 HIF3AQ9Y2N7 669 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 PCDHA9Q9Y5H5 950 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 C16orf58Q96GQ5 468 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 MLXQ9UH92 298 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 MYO10Q9HD67 2058 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 MT-ND2P03891 347 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 HTR1EP28566 365 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 GPR19Q15760 415 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 VASNQ6EMK4 673 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 RFLNAQ6ZTI6 216 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 NMNAT1Q9HAN9 279 aaPredicted RBP10.67□□□□□ -0.7
TTC28-201ENST00000397906 DECR2Q9NUI1 292 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 H0Y8X5 98 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 ICAM2P13598 275 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 CPMP14384 443 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 IFI44Q8TCB0 444 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 MTMR10Q9NXD2 777 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CD63P08962 238 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CNR2P34972 360 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 PSMB10P40306 273 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 TUBA3EQ6PEY2 450 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 OR5H2Q8NGV7 314 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 PIGCQ92535 297 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 OR2S2Q9NQN1 319 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ATF4P18848 351 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 TPMTP51580 245 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ACPTQ9BZG2 426 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 SYNPO2LQ9H987 977 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 MEIS3P1A6NDR6 274 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 LCN1P31025 176 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 XKR5Q6UX68 686 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ASRGL1Q7L266 308 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 PIAS4Q8N2W9 510 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 PLEKHJ1Q9NW61 149 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RHBDD3Q9Y3P4 386 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 MROH6A6NGR9 719 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CD40LGP29965 261 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RAB41Q5JT25 222 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 TSSK4Q6SA08 328 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CBARPQ8N350 705 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 CSNK2A3Q8NEV1 391 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 STOML3Q8TAV4 291 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 TMEM239Q8WW34 195 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CARD8Q9Y2G2 431 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 C4AP0C0L4 1744 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 GSTT2P0CG29 244 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CLDN17P56750 224 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 KCNAB1Q14722 419 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 MFRPQ9BY79 579 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 FOLH1BQ9HBA9 442 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ZNF443Q9Y2A4 671 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 GABRR3A8MPY1 467 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 E7ESA3 106 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 TMEM176BQ3YBM2 270 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 SLC25A18Q9H1K4 315 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 CCDC163A0A0D9SF12 145 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 A6NIZ1 184 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RAP1BP61224 184 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 YPEL5P62699 121 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RAP1AP62834 184 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ADARB1P78563 741 aaKnown RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 MPP7Q5T2T1 576 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 Q8N402 240 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 LSM14AQ8ND56 463 aaKnown RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 KLHDC9Q8NEP7 349 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 TUBA8Q9NY65 449 aaPredicted RBP10.66□□□□□ -0.7
TTC28-201ENST00000397906 TPPPO94811 219 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 IFNA7P01567 189 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 GPR157Q5UAW9 335 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 PINK1Q9BXM7 581 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RIMS3Q9UJD0 308 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 SLC35A3Q9Y2D2 325 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 PCDHGA1Q9Y5H4 931 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 IFNA2P01563 188 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 BMP4P12644 408 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RAB3AP20336 220 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 ART1P52961 327 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 MMP21Q8N119 569 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 OR7D2Q96RA2 312 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 POT1Q9NUX5 634 aa10.66□□□□□ -0.7
TTC28-201ENST00000397906 RNASET2O00584 256 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 LINC01565O15544 149 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 KIAA0513O60268 411 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 PRKRAO75569 313 aaKnown RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 PRLP01236 227 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 MAOAP21397 527 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 HOXC13P31276 330 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 KIAA0907Q7Z7F0 614 aaPredicted RBP10.65□□□□□ -0.7
TTC28-201ENST00000397906 SLC2A12Q8TD20 617 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 BTBD2Q9BX70 525 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 OR10A5Q9H207 317 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 OR10A2Q9H208 303 aa10.65□□□□□ -0.7
TTC28-201ENST00000397906 ADAMTSL3P82987 1691 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms