RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GLIPR2Q9H4G4 154 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 ISYNA1Q9NPH2 558 aa14.93□□□□□ -0.02
CHMP1A-201ENST00000397901 LOC105369274A0A096LPK9 316 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 C2orf92A0A1B0GVN3 265 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 LGALS8O00214 317 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 COL9A2Q14055 689 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 MINDY4Q4G0A6 757 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 ENTPD8Q5MY95 495 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 TMEM91Q6ZNR0 172 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 FGD2Q7Z6J4 655 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 NUDT13Q86X67 352 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 OR4N4Q8N0Y3 316 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 BVESQ8NE79 360 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 PRRC1Q96M27 445 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 SFXN2Q96NB2 322 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 SEC22CQ9BRL7 303 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 ARHGAP9Q9BRR9 750 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 EXTL2Q9UBQ6 330 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 NPTNQ9Y639 398 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 A0A087WUU8 490 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 TRDV1A0A1B0GX56 115 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 CD8B2A6NJW9 211 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 HIDE1A8MVS5 230 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 LANCL1O43813 399 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 MOSPD3O75425 235 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 UBXN7O94888 489 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 TCRBP04435 133 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 NMBP08949 121 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 CD8BP10966 210 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 PEPDP12955 493 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 CELP19835 753 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 FRKP42685 505 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 KIAA1161Q6NSJ0 714 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 KIAA1211LQ6NV74 962 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 CD200R1LQ6Q8B3 271 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 B3GLCTQ6Y288 498 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 C17orf107Q6ZR85 190 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 PRICKLE2Q7Z3G6 844 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 HSD17B13Q7Z5P4 300 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 OR2T35Q8NGX2 323 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 KLK6Q92876 244 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 FAM46AQ96IP4 442 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 UBL7Q96S82 380 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 RHBGQ9H310 441 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 TTYH1Q9H313 450 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 COA4Q9NYJ1 87 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 COPZ2Q9P299 210 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 EXOSC1Q9Y3B2 195 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
CHMP1A-201ENST00000397901 AIPO00170 330 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 CACNB4O00305 520 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 PDCD5O14737 125 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 YKT6O15498 198 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 NDUFS4O43181 175 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 OR1F1O43749 312 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 SYPP08247 313 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 AHCYP23526 432 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC1A3P43003 542 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 HAAOP46952 286 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 NCBP2P52298 156 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 TAS2R41P59536 307 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 LASP1Q14847 261 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 LTB4RQ15722 352 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 HACD4Q5VWC8 232 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 FAM198BQ6UWH4 519 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 NEIL3Q8TAT5 605 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 ADAMTS14Q8WXS8 1223 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 OR52A5Q9H2C5 316 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 IL23AQ9NPF7 189 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 SPATA2Q9UM82 520 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 HCFC2Q9Y5Z7 792 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 DVL2O14641 736 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 TBX19O60806 448 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 PAPLNO95428 1278 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 RB1P06400 928 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 ELK1P19419 428 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 PTNP21246 168 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 CDH11P55287 796 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 FUT5Q11128 374 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC30A6Q6NXT4 461 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 ADCK2Q7Z695 626 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 OR2L2Q8NH16 312 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 TFGQ92734 400 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 AMDHD1Q96NU7 426 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 DPH7Q9BTV6 452 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC19A3Q9BZV2 496 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 DPEP2Q9H4A9 486 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 ZCCHC4Q9H5U6 513 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 ENAMQ9NRM1 1142 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 TDP1Q9NUW8 608 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 MRPS18AQ9NVS2 196 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 ZNF624Q9P2J8 865 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 IL20RAQ9UHF4 553 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 KIAA1549LQ6ZVL6 1849 aa14.91□□□□□ -0.02
CHMP1A-201ENST00000397901 IRGMA1A4Y4 181 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 CPSF4LA6NMK7 179 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 MPTX1A8MV57 137 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 SIGLEC6O43699 453 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 LPLP06858 475 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms