RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CNOT9Q92600 299 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 ADIPOR1Q96A54 375 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 LCORQ96JN0 433 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 NODALQ96S42 347 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 GPA33Q99795 319 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 TUBA1CQ9BQE3 449 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF559Q9BR84 538 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 CCNB1IP1Q9NPC3 277 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 DNAJB12Q9NXW2 375 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC7A7Q9UM01 511 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 CEPT1Q9Y6K0 416 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 COL27A1Q8IZC6 1860 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 H3BN98 237 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 FLRT2O43155 660 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 FAM20BO75063 409 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 SOX14O95416 240 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 IL33O95760 270 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 POU1F1P28069 291 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 TTKP33981 857 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 TSPAN31Q12999 210 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 PMS2P3Q13401 168 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 CNPY1Q3B7I2 92 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMEM236Q5W0B7 351 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 C12orf73Q69YU5 71 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 XAF1Q6GPH4 301 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF613Q6PF04 617 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 CCDC103Q8IW40 242 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF614Q8N883 585 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR1N1Q8NGS0 311 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRSS27Q9BQR3 290 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 NUDT9Q9BW91 350 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 HOXD1Q9GZZ0 328 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 NXF5Q9H1B4 397 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 APMAPQ9HDC9 416 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 COPS7AQ9UBW8 275 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 PCDHGB1Q9Y5G3 927 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 LNP1A1A4G5 178 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 VSTM2BA6NLU5 285 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR6C76A6NM76 312 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 EFCAB7A8K855 629 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 LYPD3O95274 346 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 FPR3P25089 353 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 RNF144AP50876 292 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 EBPQ15125 230 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 OVCH1Q7RTY7 1134 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 BMPERQ8N8U9 685 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 AGBL5Q8NDL9 886 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF540Q8NDQ6 660 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMEM255BQ8WV15 326 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 ARPC5LQ9BPX5 153 aa10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 KRCC1Q9NPI7 259 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 MRTO4Q9UKD2 239 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-203ENST00000392128 C2orf92A0A1B0GVN3 265 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SERINC4A6NH21 518 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 AGRPO00253 132 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 KLF4O43474 513 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 IGFBP1P08833 259 aaPredicted RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 LCN1P31025 176 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 ACAA2P42765 397 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 RAB39AQ14964 217 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 NEDD8Q15843 81 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 RASSF6Q6ZTQ3 369 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 LANCL3Q6ZV70 420 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF550Q7Z398 422 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 NRMQ8IXM6 262 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 C9orf40Q8IXQ3 194 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 RNF113BQ8IZP6 322 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 LSMEM1Q8N8F7 131 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR4C3Q8NH37 302 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 TRUB1Q8WWH5 349 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC26A1Q9H2B4 701 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMEM27Q9HBJ8 222 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 RALGAPA1Q6GYQ0 2036 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 A0A0B4J2E0 115 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 A0A1B0GX12 115 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SH3D21A4FU49 640 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 IDSB3KWA1 339 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 H3BSA7 217 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 TO15178 435 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 CPNE3O75131 537 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 NTN1O95631 604 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 HEXBP07686 556 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 CYC1P08574 325 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 PCMT1P22061 227 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 ADH7P40394 386 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 GPR143P51810 404 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SNRPGP62308 76 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 PIGFQ07326 219 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 KLHL26Q53HC5 615 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SHISA6Q6ZSJ9 500 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 KIF18BQ86Y91 864 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF527Q8NB42 609 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 C17orf47Q8NEP4 570 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 RHBDD1Q8TEB9 315 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 EFHD2Q96C19 240 aaPredicted RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 RNF31Q96EP0 1072 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms