RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 AMDHD1Q96NU7 426 aa15.13■□□□□ 0.01
PTPRN2-201ENST00000389413 HOXD1Q9GZZ0 328 aa15.13■□□□□ 0.01
PTPRN2-201ENST00000389413 QRSL1Q9H0R6 528 aaKnown RBP15.13■□□□□ 0.01
PTPRN2-201ENST00000389413 METTL8Q9H825 291 aaKnown RBP15.13■□□□□ 0.01
PTPRN2-201ENST00000389413 SMAD9O15198 467 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 PGCP20142 388 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 GDI2P50395 445 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 CAV3P56539 151 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 RPS25P62851 125 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 PLCXD2Q0VAA5 305 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 OR2T35Q8NGX2 323 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 DAZLQ92904 295 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 RBM38Q9H0Z9 239 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 TAS2R8Q9NYW2 309 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 WRBO00258 174 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 PHYHO14832 338 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 LDB3O75112 727 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 EIF5AL1Q6IS14 154 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 OR5AK2Q8NH90 309 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 DYNC2LI1Q8TCX1 351 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 MSANTD3Q96H12 275 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 C4orf36Q96KX1 117 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 SIAEQ9HAT2 523 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 APOBEC3BQ9UH17 382 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 PLEKHA6Q9Y2H5 1048 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 ZNF831Q5JPB2 1677 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 C13orf42A0A1B0GVH6 325 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 OR1Q1Q15612 314 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 ZNF683Q8IZ20 524 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 OR6C4Q8NGE1 309 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 PDXPQ96GD0 296 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 TMEM41AQ96HV5 264 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 NPAP1Q9NZP6 1156 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 H3BNC9 293 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 SYT5O00445 386 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 PLPP1O14494 284 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 POLR1CO15160 346 aaPredicted RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 SCO2O43819 266 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 HCKP08631 526 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 CPMP14384 443 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 RAB2AP61019 212 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 DEFB110Q30KQ9 67 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 ATAD3CQ5T2N8 411 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 ZNF584Q8IVC4 421 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 SDR9C7Q8NEX9 313 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 OR4K17Q8NGC6 315 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 OR6T1Q8NGN1 323 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 COQ8AQ8NI60 647 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 BCL7CQ8WUZ0 217 aaPredicted RBP15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 DNAJA3Q96EY1 480 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 MNTQ99583 582 aa15.12■□□□□ 0.01
PTPRN2-201ENST00000389413 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.12■□□□□ 0.016e-7■■■■■ 34.5
PTPRN2-201ENST00000389413 ERVFC1P60507 584 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TBC1D25Q3MII6 688 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ADAMTSL4Q6UY14 1074 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 PTOV1Q86YD1 416 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 UBQLNLQ8IYU4 475 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 SPAG16Q8N0X2 631 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 CASTOR1Q8WTX7 329 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ALOXE3Q9BYJ1 711 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 CLEC2DQ9UHP7 191 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 FGFBP1Q14512 234 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 RPE65Q16518 533 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 LRRC26Q2I0M4 334 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 KCTD9Q7L273 389 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 FTMTQ8N4E7 242 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 CELF2-AS1Q8N7Q2 184 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ZNF615Q8N8J6 731 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 MFSD9Q8NBP5 474 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TGM7Q96PF1 710 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ARL6Q9H0F7 186 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 CORINQ9Y5Q5 1042 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ALG5Q9Y673 324 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 CPED1A4D0V7 1026 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 H2BFMP0C1H6 154 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 PRPH2P23942 346 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ZNF41P51814 821 aaPredicted RBP15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 RIDAP52758 137 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TEKQ02763 1124 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 NKG7Q16617 165 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ZC3H14Q6PJT7 736 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TPRA1Q86W33 373 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 OR52I1Q8NGK6 324 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TXNDC15Q96J42 360 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 OR51J1Q9H342 316 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 METTL7AQ9H8H3 244 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TAAR2Q9P1P5 351 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 HCFC2Q9Y5Z7 792 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 QSER1Q2KHR3 1735 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 A8MVJ9 347 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 ZNF878C9JN71 531 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 RORAP35398 523 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 CLDN2P57739 230 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 LRFN4Q6PJG9 635 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 BCDIN3DQ7Z5W3 292 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 GPR174Q9BXC1 333 aa15.11■□□□□ 0.01
PTPRN2-201ENST00000389413 TRIP11Q15643 1979 aa15.1■□□□□ 0.01
PTPRN2-201ENST00000389413 TRAV27A0A087WT01 109 aa15.1■□□□□ 0.01
PTPRN2-201ENST00000389413 GYPBP06028 91 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms